Gene RPC_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1640 
Symbol 
ID3972874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1773143 
End bp1773553 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content63% 
IMG OID637924756 
Producthypothetical protein 
Protein accessionYP_531521 
Protein GI90423151 
COG category[S] Function unknown 
COG ID[COG4954] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.211578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.651298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCG ATACCAAGAT TGCGGTGGTG ATCCGCACCG ACCTCGAAGC TTGGCAAAAG 
CTCAATGTCG CCGCCTTCCT GACCAGCGGC ATTGCCGCGG CGTTTCCGGA ATGTGTCGGC
GAGCCATACC AGGACGGGTC CGACACGCCG TATCTGGCGC TGATCGGACA GCCGATCCTG
ATTTATGGCG GCGAGCGACC TGCGTTAACT CGGGCCCTGG AGCGCGCGTT GGCGCGCGGC
GTCACGCCTG CGATCTACAC CGAAGACATG TTCAACACCA CGCACGATGA AGCCAATCGG
GCGGCTGTGC GCGCGGTGGC GCGCGGCGAT CTCAACCTGG TCGGCCTCGC CATGCGCGCC
GACCGCAAGG TGATCGACAA GATCGTCGAC GGGCTGAAGT TTCACAAATA G
 
Protein sequence
MQFDTKIAVV IRTDLEAWQK LNVAAFLTSG IAAAFPECVG EPYQDGSDTP YLALIGQPIL 
IYGGERPALT RALERALARG VTPAIYTEDM FNTTHDEANR AAVRAVARGD LNLVGLAMRA
DRKVIDKIVD GLKFHK