Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1608 |
Symbol | |
ID | 3973147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1741915 |
End bp | 1742439 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637924724 |
Product | hypothetical protein |
Protein accession | YP_531489 |
Protein GI | 90423119 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.136851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAAGC AAATAGAGCT TCAGCCGGAC CACTCGCCGC CTGTCCCGCT CACCGCGCAG CATGACCGCT CGGCCTTCGA TTGTGGCGTC GCAGCGCTGA ACGAGTGGCT GTGGCACCGC GCCCTCAACA ACCAAAGCCG GTTCTCGCGC ACTTACGTCG TCTGCGGGGG CAAGCGCGTG GTCGGCTATT TCTGCATCTC GGCCGGGGCG ATCGAACGCG CCAAAGCGCC CGGCAAGCTC CGCCGCAACG CCCCCGACAG CATCCCGGTC TCGGTGATCG GCCGTCTTGC GGTCAGCCGC GATCATGCGG GCCAAGGCCT CGGTGCCGAT ATGCTCGCGG ACGCACTGCG CCGCATCGCT GTGGCTTCGC AGAGCATCGG CATCGCCGCG GTGCTTATTC ACGCCAAAGA CGAAGCTGCG AAACGCTTCT ATCTGAAATG CGCCGAATTC ATCGAATATC CAACAGACAG CCGAACCCTG TTTCTGCCGA TCGAAACCGT GGTTGCGGCG TTGAAAGATG AGTAA
|
Protein sequence | MAKQIELQPD HSPPVPLTAQ HDRSAFDCGV AALNEWLWHR ALNNQSRFSR TYVVCGGKRV VGYFCISAGA IERAKAPGKL RRNAPDSIPV SVIGRLAVSR DHAGQGLGAD MLADALRRIA VASQSIGIAA VLIHAKDEAA KRFYLKCAEF IEYPTDSRTL FLPIETVVAA LKDE
|
| |