Gene RPC_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1605 
Symbol 
ID3973144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1739917 
End bp1740300 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content65% 
IMG OID637924721 
Productcupin 2, barrel 
Protein accessionYP_531486 
Protein GI90423116 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.843392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAA TTGTGTTGGG ATTGCTCACG GTTGCGTTGG CCGGCGGGCT GGCCTTGGCT 
CAGCAAGCCG GGATCAAGCG CACGCCGCTG CAAAAAGTCG AGTTCCCCGA GGGCTATGTG
ACCATTACCG GCATCGCCGA AATCCCCCCT GGCGGCAGCG CCGGGCGACA CACCCATCCC
GGCGTCGAGA CCGGCTACCT GCTCGAAGGC GAGACCGACA TGCTGATCGA CGGCCAACCG
ACCCAACACC TCAAAGCGGG GGATTCCTAT GCGATCCCCG CCGGCGTGGT GCACGACGCC
AAGGTGCATG GCGACAAATC CGCCAAGGTG ATCGCCATCT ACGTGGTCGA CAAGACCAAG
CCGCTCGCCT CGCCGGCGCC GTGA
 
Protein sequence
MKRIVLGLLT VALAGGLALA QQAGIKRTPL QKVEFPEGYV TITGIAEIPP GGSAGRHTHP 
GVETGYLLEG ETDMLIDGQP TQHLKAGDSY AIPAGVVHDA KVHGDKSAKV IAIYVVDKTK
PLASPAP