| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1549 |
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| Symbol | |
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| ID | 3971682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1682168 |
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| End bp | 1682416 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637924664 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_531430 |
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| Protein GI | 90423060 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00273376 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.068987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGACA AGCGCAGCAG CCTTCGCCGT CGCGTGCTGA AGGCCGGCAC CATCGTGTTC
GGCGGCGGCG GCATCAGCTG CACGGTGCGC AATCTGTCGG CCAGCGGCGC CGCGCTCGAC
GTCGCCAGTC CGATGGGCAT CCCCGAGCAG TTCGAACTGA TGATCGAGAC CGACGCGCTG
GCGCGTCCCT GCCATGTCAT CTGGCGCAAG GAAAAGCGGA TCGGCATTGC CTTCCGCCAA
GGCGCTTAG
|
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| Protein sequence | MDDKRSSLRR RVLKAGTIVF GGGGISCTVR NLSASGAALD VASPMGIPEQ FELMIETDAL
ARPCHVIWRK EKRIGIAFRQ GA
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