Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1549 |
Symbol | |
ID | 3971682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1682168 |
End bp | 1682416 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637924664 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_531430 |
Protein GI | 90423060 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00273376 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.068987 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACA AGCGCAGCAG CCTTCGCCGT CGCGTGCTGA AGGCCGGCAC CATCGTGTTC GGCGGCGGCG GCATCAGCTG CACGGTGCGC AATCTGTCGG CCAGCGGCGC CGCGCTCGAC GTCGCCAGTC CGATGGGCAT CCCCGAGCAG TTCGAACTGA TGATCGAGAC CGACGCGCTG GCGCGTCCCT GCCATGTCAT CTGGCGCAAG GAAAAGCGGA TCGGCATTGC CTTCCGCCAA GGCGCTTAG
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Protein sequence | MDDKRSSLRR RVLKAGTIVF GGGGISCTVR NLSASGAALD VASPMGIPEQ FELMIETDAL ARPCHVIWRK EKRIGIAFRQ GA
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