Gene RPC_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1518 
SymbolflgC 
ID3972166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1655353 
End bp1655778 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content65% 
IMG OID637924633 
Productflagellar basal body rod protein FlgC 
Protein accessionYP_531399 
Protein GI90423029 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0198818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.54052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAG ATTCGATGGA TTTCTCCCGC TCGATGGGGA TCGCGACCTC GGGCCTGCGC 
GCCCAGGCCG CGCGGATGCG GGTGATCTCG GAGAACATCG CCAACGCCGA ATCCACCGCG
CAGACCCCGG GCGGCGATCC GTATCGCCGC AAGGTGCCGA CCTTCACCTC GGCGCTGGAT
CGCGCGCTCG ACGCCAGGGT GGTCACGCTC GGCCGGGTCA AGCCGGACAA TTCCAACTTT
CGGGTCAAAT ACGAGCCCGG CAACCCGGCG GCCGACGCCG CCGGCAACGT CAAATACCCC
AACGTCAATC CGCTGGTGGA AATGACCGAC ATGCGCGACG CGCAGCGATC CTACGAGGCC
AACCTCAACA TCATCAGCGC CACGCGGCGC ATGATTCAAC GCACCCTCGA CATCCTCAAG
GCGTGA
 
Protein sequence
MAEDSMDFSR SMGIATSGLR AQAARMRVIS ENIANAESTA QTPGGDPYRR KVPTFTSALD 
RALDARVVTL GRVKPDNSNF RVKYEPGNPA ADAAGNVKYP NVNPLVEMTD MRDAQRSYEA
NLNIISATRR MIQRTLDILK A