Gene RPC_1507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1507 
SymbolflgF 
ID3972155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1643417 
End bp1644181 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content64% 
IMG OID637924622 
Productflagellar basal body rod protein FlgF 
Protein accessionYP_531388 
Protein GI90423018 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.75995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAATG CACTCCTCAT CGGACTGTCG CGGCAGATGA CGTTGGAGCG ACAGATGGAC 
GTCGTTGCCA ACAACGTTGC GAACGTCAAC ACCACCGGCT TCAAAGCCGA CAAATCGCTG
TTTCAGGAAT ACCTGTCGCC GGGCGCCCAT GAGGACAACT TCATCGGCCG CGATCGCCGC
GTCAGCTACG TCCAGGACCG CGCCACCTTT CACGATTTCT CCTCCGGCCC GCTGGAGCAG
ACCAAGAACC CGCTCGACGT CGCGATCGAC GGCAACGCCT TCCTGGCGGT TCAGACCCCG
GCCGGCGAGC GCTTCACCCG CGACGGCGGG CTGCAGATCA ACGCCCAAGG CCAGTTGGTC
ACCGCGTCGG GCTATCAGGT GCTCGGCACC AACGGCCCGA TCGTGTTTCA GCCGACCGAC
AAGGAGATCA CCATCGCCGA CGACGGCAAC GTCACCGTGC TCGAGGGCTC CTCGGCGGTG
GATTCGCTGC GCGGCAAGCT TCGCCTGGTC AATTTCGCCG AAGCCCAGCG GCTGCTGAAA
GAAGGCTCCA ATCTGTACTC CGCCGGCCCC GGTGCCGCGG CGCAGCCGGC GCTCACCGCC
CGAGTGCACC AGGGCTACAT CGAAAAATCC AACGTCAACG CGGTGGCCGA GATGAGCAAG
ATGATCGAGG TCACCCGCGC CTACACCCAA ATCTCGTCGA TGCTGCAGCA GCAGGGCGAT
CTGCGCAAAA CCGCGCTCGA GAAACTTGCC GACGTTCCGG CGTAA
 
Protein sequence
MENALLIGLS RQMTLERQMD VVANNVANVN TTGFKADKSL FQEYLSPGAH EDNFIGRDRR 
VSYVQDRATF HDFSSGPLEQ TKNPLDVAID GNAFLAVQTP AGERFTRDGG LQINAQGQLV
TASGYQVLGT NGPIVFQPTD KEITIADDGN VTVLEGSSAV DSLRGKLRLV NFAEAQRLLK
EGSNLYSAGP GAAAQPALTA RVHQGYIEKS NVNAVAEMSK MIEVTRAYTQ ISSMLQQQGD
LRKTALEKLA DVPA