Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1507 |
Symbol | flgF |
ID | 3972155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1643417 |
End bp | 1644181 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637924622 |
Product | flagellar basal body rod protein FlgF |
Protein accession | YP_531388 |
Protein GI | 90423018 |
COG category | [N] Cell motility |
COG ID | [COG4786] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.75995 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAATG CACTCCTCAT CGGACTGTCG CGGCAGATGA CGTTGGAGCG ACAGATGGAC GTCGTTGCCA ACAACGTTGC GAACGTCAAC ACCACCGGCT TCAAAGCCGA CAAATCGCTG TTTCAGGAAT ACCTGTCGCC GGGCGCCCAT GAGGACAACT TCATCGGCCG CGATCGCCGC GTCAGCTACG TCCAGGACCG CGCCACCTTT CACGATTTCT CCTCCGGCCC GCTGGAGCAG ACCAAGAACC CGCTCGACGT CGCGATCGAC GGCAACGCCT TCCTGGCGGT TCAGACCCCG GCCGGCGAGC GCTTCACCCG CGACGGCGGG CTGCAGATCA ACGCCCAAGG CCAGTTGGTC ACCGCGTCGG GCTATCAGGT GCTCGGCACC AACGGCCCGA TCGTGTTTCA GCCGACCGAC AAGGAGATCA CCATCGCCGA CGACGGCAAC GTCACCGTGC TCGAGGGCTC CTCGGCGGTG GATTCGCTGC GCGGCAAGCT TCGCCTGGTC AATTTCGCCG AAGCCCAGCG GCTGCTGAAA GAAGGCTCCA ATCTGTACTC CGCCGGCCCC GGTGCCGCGG CGCAGCCGGC GCTCACCGCC CGAGTGCACC AGGGCTACAT CGAAAAATCC AACGTCAACG CGGTGGCCGA GATGAGCAAG ATGATCGAGG TCACCCGCGC CTACACCCAA ATCTCGTCGA TGCTGCAGCA GCAGGGCGAT CTGCGCAAAA CCGCGCTCGA GAAACTTGCC GACGTTCCGG CGTAA
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Protein sequence | MENALLIGLS RQMTLERQMD VVANNVANVN TTGFKADKSL FQEYLSPGAH EDNFIGRDRR VSYVQDRATF HDFSSGPLEQ TKNPLDVAID GNAFLAVQTP AGERFTRDGG LQINAQGQLV TASGYQVLGT NGPIVFQPTD KEITIADDGN VTVLEGSSAV DSLRGKLRLV NFAEAQRLLK EGSNLYSAGP GAAAQPALTA RVHQGYIEKS NVNAVAEMSK MIEVTRAYTQ ISSMLQQQGD LRKTALEKLA DVPA
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