Gene RPC_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1475 
Symbol 
ID3973836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1610416 
End bp1610955 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID637924590 
Producthypothetical protein 
Protein accessionYP_531356 
Protein GI90422986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.106869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.29904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTACT CCGTTGAATG CAGCTACGCC GATGCCGGCA GCGAAACCGA ATGGAGTAAT 
TTCTACAGCC TTGAAAAGCT GCCCGCGTTG ATCTCGGTAA GCGGCTTTCA CACCTCGCAG
CGTTTCATGG CGTTGCGCCG CGGTTATCCG GTCTATCTGG CGCTCCACAG CATCGACGGG
CTCGATGTGC TGACCGGAGA AGAGTATCGC CAAAAAGGCG GCGGCAATTT CGCGCGATGG
CAGCAGCACA TCACCGACTG GCACCGGAAC CTCTATGACG GTCTCGACCG GGCTCCGGCC
GTGGGCCCCG ACGAACTGCT GTTGCTTTGC CCGAACGGTC CGGAGTCTCT GATCAAGCTG
GAGCTCTCGC CGGCCGCCAT GCACGCCGTG GCTCTGGAGA AGACGCCGGA CCGCCGCTGG
CTCGCCAAGC TGGATCGGCG AGGCGCCGGG CTTGCCGAGC AGCTGTCCGA CGATATCCAG
CTCTACGCGC CGATGACCGA GCAGCTGACC AGCGCCCGCT CCGCCGCGGT CGCGCAGTAA
 
Protein sequence
MIYSVECSYA DAGSETEWSN FYSLEKLPAL ISVSGFHTSQ RFMALRRGYP VYLALHSIDG 
LDVLTGEEYR QKGGGNFARW QQHITDWHRN LYDGLDRAPA VGPDELLLLC PNGPESLIKL
ELSPAAMHAV ALEKTPDRRW LAKLDRRGAG LAEQLSDDIQ LYAPMTEQLT SARSAAVAQ