Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1469 |
Symbol | |
ID | 3973830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1605543 |
End bp | 1606649 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637924584 |
Product | hypothetical protein |
Protein accession | YP_531350 |
Protein GI | 90422980 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0291454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.344342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCGAG TGTTGACCGC GCTGCGGCGT GGTTTCAAGG AGCGAGTGGG CTGGAAGCGG CTCGGGATCG TTGCAAGCAT CCTCATCATC GGTTTCGCGA TCCACTCGCT CGTCAAGACG CTGAAGGGCG TCGATAGCGG CGTCATTCTT GTTGCGCTGA CCGAGAAATC CTCCGGTCAG ATCGCACTCG CGGCGTTGTG CGTGATCGGC GCGTTCTGCA CGCTGACGTT TTATGATTTC TTCGCGCTGC GCACCATCGG CAAGCGCCAC ATCCCGTACC GTATCGCCGC GCTGACCGGC TTCACCTCCT ATACGATCGG CCACAACATC GGCGCCACGG TGTTCACCGG CGGCGCGATC CGGTTCCGGA TCTATTCCGA CTACGGCCTC ACCGCGATCG ACGTCGCCAA GATCTGCTTC ATCTCCGGGC TGACGTTCTG GCTCGGCAAC CTGTTCGTGC TCGGCATCGG CATGGCCTGG CATCCGGCGG CGGCGAGTTC GATGGATCTG TTGCCGGAAT CGGTCAACCG GCTGATCGGC ATCGGCTGCC TCGCCGGCAT CGCCGGCTAT CTGACCTGGA TCGCGATGGG CAAACGCCGC CGCGAGCTCG GCCAGAACGG CTGGAAGGTG GTGCTGCCCT CGGCGCGGCT GACGCTGCTG CAAGTCTTGA TCGGCGTGGT CGATCTCGGC TTCTGCGCGC TGGCGATGTA CCTTTTGATG CCGGCGCAGC CGGGGATCGA TTTCGTCTCG CTGGCGGTGG TGTTCATCCT CGCCACCCTG CTCGGCTTCG CCAGCCATGC GCCGGGCAGC CTCGGGGTGT TCGACGCCGC GATGCTGCTG GCGCTGCCGC AATTCGCCCG CGAGGAGCTG GTCGCCACGC TGGTGATCTT CCGGCTATTG TATTTCGTGA TCCCGTTCGG GATCTCGATC ACCATCATGG GCACCCGCGA ATTGTGGCTC AACGTCGTCG AGCCGTGGCG GGCGCGCCGC GTCAACGGCC ACGGCCATCC GCCGCTGGCG GCGATCGCGC AGCGCCCCGG CATTCCGAAG CGGCTGCCGC CGCCGGCCAA GCCGGCGCAG CCGGCCAAGC GGCACTCCAA GGGCTGA
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Protein sequence | MHRVLTALRR GFKERVGWKR LGIVASILII GFAIHSLVKT LKGVDSGVIL VALTEKSSGQ IALAALCVIG AFCTLTFYDF FALRTIGKRH IPYRIAALTG FTSYTIGHNI GATVFTGGAI RFRIYSDYGL TAIDVAKICF ISGLTFWLGN LFVLGIGMAW HPAAASSMDL LPESVNRLIG IGCLAGIAGY LTWIAMGKRR RELGQNGWKV VLPSARLTLL QVLIGVVDLG FCALAMYLLM PAQPGIDFVS LAVVFILATL LGFASHAPGS LGVFDAAMLL ALPQFAREEL VATLVIFRLL YFVIPFGISI TIMGTRELWL NVVEPWRARR VNGHGHPPLA AIAQRPGIPK RLPPPAKPAQ PAKRHSKG
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