| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1466 |
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| Symbol | |
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| ID | 3973827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1601175 |
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| End bp | 1602098 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637924581 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_531347 |
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| Protein GI | 90422977 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.412143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTGGA TCGCGCCCGA ACTGAGACCG CTGTCCGCGG TGGTGGCGGC GACGCTGGCC
TGCGACGGCA CGCTGATCGA AGCCAATGCC GGCTTCCTGC GCATCGCCCG GCTGCCCGCG
CAACAGCTGA TCGGCGCGCC GGCGGCGCGG GCTTTCGTGC AGCCGAGCTT CGCCGCGCTG
CTGCGGCTGG CGCCCGCCGC CGATGACGAG ATCCACCGCG GGCTTTTGAC CATGGGCGAT
CCGATGGCCG CCACCCGCAC GCTGCACGGC CGGGTCTGGC GCCGCGGCGG GCAGCTGCAG
GTGCTCGCCG AATACGACAT CGACGAGCTG GAGCGGCTCA ATGCCAAGAT GATCGAGCTC
AACCGCGACT ACGCCGACGC GCAGTTCGAA CTGGCGCAGA GCAACATCAA GCTGCAGCAG
CGCGAGGCCG AGATCGTCGC CTTGACGCTG ACCGATTCGC TCACCGGCCT CGGCAATCAC
CGCCGCTTCG AGCAGGAACT CAGCACCGAG ATCAAACGCT TCGCGCGCAC CGCCGAGCCG
CTCAGCGCGC TGATGGTGGA TCTCGATCAC TTCAAGGCCA TCAACGACAG CTATGGCCAC
GACGCCGGCG ACAAGGTGCT GGCGGCGTTC GCCGCGCTGC TGCGCGCGCA GATCCGCGCC
ACCGAGATCG CCGCGCGGAT CGGCGGCGAG GAGTTCGTGG TGCTGATGCC GCACACCGGG
CTGCAGCAGG CGATGCTGAC GGCCGAACGG ATCCGCACCG CGCTGGCGGC GGTGCCGATC
CCGCCGGCGT CGCAGCCGGT GACCGCGAGC TTCGGCGTGG CGACGCTGGC AACCGCGGAG
TCGCGCGACG CCTTCATGCG GCGGGTCGAT TGCGCGCTGT ACGCGGCGAA ACACTCCGGC
CGCAACTGCG TGGTCGCGGG GTAG
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| Protein sequence | MSWIAPELRP LSAVVAATLA CDGTLIEANA GFLRIARLPA QQLIGAPAAR AFVQPSFAAL
LRLAPAADDE IHRGLLTMGD PMAATRTLHG RVWRRGGQLQ VLAEYDIDEL ERLNAKMIEL
NRDYADAQFE LAQSNIKLQQ REAEIVALTL TDSLTGLGNH RRFEQELSTE IKRFARTAEP
LSALMVDLDH FKAINDSYGH DAGDKVLAAF AALLRAQIRA TEIAARIGGE EFVVLMPHTG
LQQAMLTAER IRTALAAVPI PPASQPVTAS FGVATLATAE SRDAFMRRVD CALYAAKHSG
RNCVVAG
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