| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1460 |
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| Symbol | |
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| ID | 3973438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1591582 |
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| End bp | 1595142 |
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| Gene Length | 3561 bp |
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| Protein Length | 1186 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637924575 |
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| Product | Type II restriction enzyme methylase subunits-like |
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| Protein accession | YP_531341 |
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| Protein GI | 90422971 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1002] Type II restriction enzyme, methylase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.811371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGACTG CAAGCATTCC GGACGTCGAG CAATTCATCA GCCGTTGGCA GGGCCGCGAA
GGCGGCCAGG AGCGTGCCAA CTACGTTTCG TTTCTCAACG AGCTGATCGC GCTGTTGGGT
TTGCCGAAGC CGGACCCGGC CGACGCCACC CACGAGCACA ACGACTACGT GTTCGAGCGC
GCGGTCAAGA AGCATAAGGA CGACGGCGCC TCGCACGGCC GCATCGACCT CTACAAGAAG
AACAGCTTCG TACTCGAAGC CAAGCAGAGC CGGCTGAAGG GCGTCAAGAA GGTCGCCGGC
CAGAACGACC TGTTCAATGC CGATGTGCCG GAAGCCTCCC GCGGCCGCCG CGGCGCCGAC
CGCGCCTGGG ACGTCTTGAT GCTGAACGCC AAGCGGCAGG CGGAGGAATA CGCCCGCGCG
CTGCCAGCCT CGCACGGCTG GCCGCCCTTC ATCCTGGTCT GCGACGTCGG CCACTGCATC
GAGGTCTATG CGGACTTCTC CGGGCAGGGC AAGAACTACA CCCAGTTTCC CGACCGTCAG
AGCTTCCGCA TCTATCTGGA AGACCTGCGC GACGAGACGG TGCGCGAGCG GCTGCAGAAG
ATCTGGACCG AGCCGCAGGC GCTCGATCCG GCGCAAGCCT CGGCGAAAGT CACCCGCGAC
ATCGCCAAGC GGCTGGCGCA GGTCTCGCTG GCGCTGGAGA AGAAGGGCTT TGTCGCCGAC
GACGTCGCGA TGTTCCTGAT GCGCTGCCTG TTCACGATGT TCGCCGAGGA CGTCGGCCTG
TTGCCGGACA AATCCTTCAA GACCGTGTTG GAAGAGTGTG AGAAGAATCC CGAAGCCTTC
GTCCACGACG TCGGCCAGCT TTGGGAGGCG ATGGACTTAG GTGCCTGGGC GCACGCGCTG
AAAACCAAGG TGAAGAAATT CAACGGCGAG TTTTTCAAGA ACCGCGCGGC GCTGCCGCTC
GGGCGCGAAG AGATCGGCGA GCTGCGCCAG GCCGCGAGCT ACGATTGGAA CGAGGTCGAT
CCCTCGATCT TCGGCACGCT ACTGGAACAG GCGCTGGATC CGCAGGATCG CAAGAAGCTC
GGCGCACACT ACACGCCGCG CGCTTATGTC GAACGCCTGG TGGTCGCCAC CATCATCGAG
CCTTTGCGCG AAGACTGGCG CAACGTGCAG GCCACCGCGG AGACGCGGCG CGGCGCCGGC
GACCTCAAGG GCGCGGCGGC GGCGGTGCAG GCGTTCCACG ACAAGCTATG TGCGACCCGG
GTGCTCGATC CGGCCTGCGG GACCGGAAAT TTCTTGTATG TCTCGCTCGA ACTGATGAAG
CGCCTCGAAG GCGAAGTGCT GGAAGCGCTG CTCGACCTCG GCGGCCAGGA AGCGTTGCGC
GGCCTCGGCT CGCATTCGGT CGACCCGCGT CAGTTCTTGG GTCTTGAAAT CAATCCGCGC
GCCGCGGCGA TCGCCGAACT GGTGCTGTGG ATCGGCTATC TGCAATGGCA TTTCCGCACC
AAGGGCGGCC CGCCCGACGA GCCGATCCTC AAGGCGTTCA AGAACATCCA GGTCAAGAAC
GCGGTGCTGA CCTGGGACGG CGCGCCGCTG CCGAAAATCG TCGACGGCAA GGAGACCTAT
CCGAATGCGA AGCGGCCGGA ATGGCCGGCG GCGGAGTTTA TCGTGGGGAA TCCGCCGTTT
ACCGCTGGAC AGGACTTTCG TCGCGAATTC GGCGAATCTT ACGCTCAAGC ACTTTGGCTA
AATTACAAAC ACATTAGCGG TGCAGCGGAC CTAGTGATGT ATTGGTGGGA CCGCGCCGCA
GAATTATTAA ACCGCAAGGG CACAGCTCTT CGTCGGTTTG GATTTGTCAC GACGCGAACG
ATAACACATG AATTTTCTGG TCGAGTAGTA GCGCGCCACC TGAATGCAAA TGATCCCATC
TCAATTGTGT TGGCTGTCCC AAACCACCCA TGGACGAGGG GTCGAGATGC GGCAGCAGTT
CGGATTGCAA TGACGGTAGT TGAAGCAGGC CACCGCAATG GCCTACTTCA AAATGTGATA
AGTGAAAGCG ACTTGGACGC CGATGAACCC ACTATTCTCC TCGAAGATCG ATGCGGAAAA
ATTAACCCCA ACCTTACTAT CGGTATTGAC CTTGCCTCCG CTGGGAGATT GCGGGCCACA
GATGGCATCT GTCATGATGG CGTGAAGCTT CACGGAAAAG GGTTCATTGT CCAATCCGCA
GAATTGGAGC ACTTAGGCTT AGATCGACGA AAAGGTATCG AAAAGGTCAT TCGTCCCTAC
CTAAATGGAA GGGATATCAA TCAACGGACC AGAGGCCTTT TCGTTATCGA TTTATTCGGT
TTGGCCGAGG ACGAGGTTCG TCTGAATTTC CCAGAGATTT ATCAGAAATT GCTTTTGAAA
GTTAAGCCCG ATCGCGATGC CAACCCTCGT CCTTCGAGGC GAGACAATTG GTGGCTGTTT
GGCGAAAATC AGCCAAAGAT GCGAAACGCC ATCGCATCGC TAGGGCGCTA TATTGGAACG
GTTGATACTT CGCGGCATCG GATATTTAGT TTCCTTGATG AGAAGATGCT CTGTGACGAC
AAAGTTGTCA TTGTTGCTTC CACAGATGCT TTCGACCTGG GAGTTTTGTC ATCTCGCATT
CATTGCACTT GGAGCAATAA GTCAGGGGTT CGTCTTGGAG TTGGAAATGA TCCTGTATAT
GCCAGCAACC GCTGCTTCGA TCCCTTTCCC TTCCCCGCCG CCAACAACAT CCAGAAGCAG
ACTATTCGGG TCATCGCTGA AGAACTCGAC GCGCATCGCA AGCGGGTGCT CAAGGAGCAT
CCGCATCTGA CGCTGACCGG GCTTTATAAT GTGCTGGAGC GGTTGCGGGC GGGGGCTGCG
ATCGCCCCTT CATCCGCGAG CGCAGCGCGT GGTGCGGGGG GGGCGGGAGG CGACGCCGGC
GCCGTCGCGC GCGGCAAGAC CCCCCACCCT AACCCTCCCC ACCGCTCCGC GGGGGGAGGG
GATCAGGCAG CGGCTGCGGC TTCCGCCGTG CCTGCTTTGA CCCCGGACGA ACAGCGCATC
TTCGACGACG GGCTGGTGCT GATCCTGAAA GAGCTGCACG ACAAGCTCGA TGTCGCGGTC
GCAGAAGCCT ATGGCTGGCC GGCGGATCTG TCGGACGATG AGATTTTGGC GAAGCTGGTG
GCGCTGAACA AGGAGCGCGC CGAGGAGGAG AAACGCGGGC TGGTGCGCTG GTTGCGGCCG
GACTACCAGA TTCCGCGGTT CGGCAAGGGC CTCGACAAGC AGGCAGCGCG CGAAGAAGGC
GCGCAGGTCA CGGCCGATCT TATCGGCGTC GAAACCGTGC AGAAGCGCGC GTTTCCGACC
GTCGCCGTGG AACAGACAGC GGCGGTGTTC GCGGCGCTGG CCGCGGCATC CGCGCCGCTC
GATGCCAAGA CGCTGGCGGC GCAGTTCAAG CGTACCAAGA CCACCGAGAA GAAAGTCGGC
GAGGTGTTGG CCTCGCTGGC GCGGCTCGGC TACGTCACCT CCGATGACGG CATGACATTC
GCCCTGCGCC GCGTCGCGTA G
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| Protein sequence | MGTASIPDVE QFISRWQGRE GGQERANYVS FLNELIALLG LPKPDPADAT HEHNDYVFER
AVKKHKDDGA SHGRIDLYKK NSFVLEAKQS RLKGVKKVAG QNDLFNADVP EASRGRRGAD
RAWDVLMLNA KRQAEEYARA LPASHGWPPF ILVCDVGHCI EVYADFSGQG KNYTQFPDRQ
SFRIYLEDLR DETVRERLQK IWTEPQALDP AQASAKVTRD IAKRLAQVSL ALEKKGFVAD
DVAMFLMRCL FTMFAEDVGL LPDKSFKTVL EECEKNPEAF VHDVGQLWEA MDLGAWAHAL
KTKVKKFNGE FFKNRAALPL GREEIGELRQ AASYDWNEVD PSIFGTLLEQ ALDPQDRKKL
GAHYTPRAYV ERLVVATIIE PLREDWRNVQ ATAETRRGAG DLKGAAAAVQ AFHDKLCATR
VLDPACGTGN FLYVSLELMK RLEGEVLEAL LDLGGQEALR GLGSHSVDPR QFLGLEINPR
AAAIAELVLW IGYLQWHFRT KGGPPDEPIL KAFKNIQVKN AVLTWDGAPL PKIVDGKETY
PNAKRPEWPA AEFIVGNPPF TAGQDFRREF GESYAQALWL NYKHISGAAD LVMYWWDRAA
ELLNRKGTAL RRFGFVTTRT ITHEFSGRVV ARHLNANDPI SIVLAVPNHP WTRGRDAAAV
RIAMTVVEAG HRNGLLQNVI SESDLDADEP TILLEDRCGK INPNLTIGID LASAGRLRAT
DGICHDGVKL HGKGFIVQSA ELEHLGLDRR KGIEKVIRPY LNGRDINQRT RGLFVIDLFG
LAEDEVRLNF PEIYQKLLLK VKPDRDANPR PSRRDNWWLF GENQPKMRNA IASLGRYIGT
VDTSRHRIFS FLDEKMLCDD KVVIVASTDA FDLGVLSSRI HCTWSNKSGV RLGVGNDPVY
ASNRCFDPFP FPAANNIQKQ TIRVIAEELD AHRKRVLKEH PHLTLTGLYN VLERLRAGAA
IAPSSASAAR GAGGAGGDAG AVARGKTPHP NPPHRSAGGG DQAAAAASAV PALTPDEQRI
FDDGLVLILK ELHDKLDVAV AEAYGWPADL SDDEILAKLV ALNKERAEEE KRGLVRWLRP
DYQIPRFGKG LDKQAAREEG AQVTADLIGV ETVQKRAFPT VAVEQTAAVF AALAAASAPL
DAKTLAAQFK RTKTTEKKVG EVLASLARLG YVTSDDGMTF ALRRVA
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