Gene RPC_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1397 
Symbol 
ID3973318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1525288 
End bp1525737 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content65% 
IMG OID637924512 
Producthypothetical protein 
Protein accessionYP_531278 
Protein GI90422908 
COG category[S] Function unknown 
COG ID[COG5654] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.287253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGT GGCGGATCTC GAATTATGCG GATTTGTCAG GCCTTGGCGG GTTGCGGGCG 
AGCGGCCGGT GGCATAGTCG CGGCAAGCGG ATCGTCTATC TGGCCGACCA CCCGGCCAGC
GCGCTGCTGG AAATGCTGGT CCATATGGAC CGCGACCTGT TGCCCGCGAG CTATCGGCTG
CTGCGTGTCC TCACACCCGA GAGGCTCGCC GTTGACCGGA TCGACGCTGA GGCTTTAGCT
TCGGACTGGC AGCATCGGCC GGCCACAACC CGCGACCTCG GCGATCAATG GCTTGACCGC
TCCTCAAGCG CCTTGCTGCA GGTGCCGTCG GTGATCGTCC CGCAGGCCTG GAATGTCCTG
CTCAATCCAG CGCATCCCGA CGCCGGCGCG ATCACAATTG CCGAGATTAT CGAAGCGCCG
TTCGATCCGC GCCTGCTGCC CGAGGGATGA
 
Protein sequence
MELWRISNYA DLSGLGGLRA SGRWHSRGKR IVYLADHPAS ALLEMLVHMD RDLLPASYRL 
LRVLTPERLA VDRIDAEALA SDWQHRPATT RDLGDQWLDR SSSALLQVPS VIVPQAWNVL
LNPAHPDAGA ITIAEIIEAP FDPRLLPEG