Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1391 |
Symbol | |
ID | 3973312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1517270 |
End bp | 1518640 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637924506 |
Product | peptidase M16-like |
Protein accession | YP_531272 |
Protein GI | 90422902 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCATGT TCGGTCCCCG CGCGCTGCGC ACAGCCTTGG CGGCTACGGC CTGCCTGCTC GCCACCGCGC TGTCGACCAC GAGTTCGTTT GCCGCGGCAA AAATCCAGCG GCTGGTGTCG CCGGGCGGCA TCGAGGCCTG GTTCGTGCCG GACGCCACCG TGCCGCTGAT CGCGATGGAA TACGCCTTTG GCGGCGGCGC CACGCAGGAC CCCGCGGACA AATCCGGGCT CGGCCACATG GTCGCCAATC TGCTCGACGA AGGCGCCGCC GATCTCGACT CCAAGACCTA CCACGAGCGG CTCGATCGCC GCGCCATCGA GCTCAGCTTC AACGCGACCC GCGATTACTT CCGCGGCTCG CTGCGGATGC TGAAAGAGCA TCGCAGCGAG GCGTTCGATC TGCTGCGGAT CGCGCTGACC AAGCCGCGCT TCGAGGCCCA GGATATCGAG CGGGTGCGCG CCCAGGTGCT GTCGACGCTG CGCCGGGAGT CCACCAATCC GAATTCGATC GCCAGCCGCA AGTTTCTCGA AGTGGCGTTC GGTGATCACC CCTATGGCCG CCCGTCCAAC GGCACGCTCG CCAGCATCCC GACCATCCAG GCCGACGATT TGCGAAGCTA TGCCGGCCAT GTGCTGGGCA AGGACACGCT GAAGATCGCG GTGGTCGGCG ATATCGACGC CGTCTCGTTG GGCGCGCTGC TGGATCAGAC CTTCGGCGGC CTGCCGGCCA AGGCCGATCT GGTCGCGGCG CCGGAGATCG CAGCCGCCAA GCCGCCGCAG CGCGCCTTCA TCGCGCTCGA CGTGCCGCAG ACCACGGTAA CGTTCGGCGG TCCCGGGATG AAACGCGCCG ATCCGGATTT CATGGCCGGC TACGTCGTCA ACCATATTCT CGGCGGCGGC ACGCTGTCGT CGCGGCTGTA TCACGAGGTC CGCGAGAAGC GCGGGCTGGC CTATTCGGTC TATGAAACGC TGTTGTGGAT GGAGCATTCC GCGCTGTTCA TCGGCAACAC CGGCACCCGC GCCGATCGCG CCGCCGACAC CGTGGCGGCG ATCGATGAGG AAATCCGCCG GATGGCCGAG CAGGGGCCGA CCCAGCAGGA ACTCGACGAG GCCAAGTCGT ATCTGAAGGG CTCGCAGATG CTGGCGCTCG ACACCTCGTC GAAGCTCGCC TCGGCGCTGC TGCAATATCA GCTCGACAAA TTGCCGATCG ATTACATCGA AAAGCGCAAC GCCATCGTCG ACGCGGTGAC GCTCGACGAC GCCAAGCGCG CCGCGAAGCG GCTGTGGGCC AATGGCCTCC TGACCGTGGT GGTCGGCCGC GCCGCGCAGG CCGCGGCCGA GCCGGTCGCC AAGCCGCCGA GCGCGAATTA G
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Protein sequence | MIMFGPRALR TALAATACLL ATALSTTSSF AAAKIQRLVS PGGIEAWFVP DATVPLIAME YAFGGGATQD PADKSGLGHM VANLLDEGAA DLDSKTYHER LDRRAIELSF NATRDYFRGS LRMLKEHRSE AFDLLRIALT KPRFEAQDIE RVRAQVLSTL RRESTNPNSI ASRKFLEVAF GDHPYGRPSN GTLASIPTIQ ADDLRSYAGH VLGKDTLKIA VVGDIDAVSL GALLDQTFGG LPAKADLVAA PEIAAAKPPQ RAFIALDVPQ TTVTFGGPGM KRADPDFMAG YVVNHILGGG TLSSRLYHEV REKRGLAYSV YETLLWMEHS ALFIGNTGTR ADRAADTVAA IDEEIRRMAE QGPTQQELDE AKSYLKGSQM LALDTSSKLA SALLQYQLDK LPIDYIEKRN AIVDAVTLDD AKRAAKRLWA NGLLTVVVGR AAQAAAEPVA KPPSAN
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