Gene RPC_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1383 
Symbol 
ID3973304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand+ 
Start bp1508439 
End bp1509020 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content69% 
IMG OID637924498 
ProductNUDIX hydrolase 
Protein accessionYP_531264 
Protein GI90422894 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.744983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGCCG CGGATGTATT GGCAAGCTGG CCGGCGGGGC GCAAGCGTCA CGGCTCGGGC 
CCGCGTGAGG ATTCGGTGGT GTCGAACATG CAGAAGCTGC GACGCGCGCT GGAGCCGGCG 
CTGCGCCGGG TGTTTCACCT GTATTGGCGG CTGGCGCGCG GCATGACGCT CGGGGTGCGC 
GGCCTGGTGC TCGACGACGC CGGCCGGGTT TTCCTGATCC GGCACACTTA CGTCAGCGGC 
TGGCATTTGC CGGGCGGCGG TGTCGAGGTC GGCGAGACCT TTCGCGAGGC GCTTTGCCGC 
GAGGTGATGG AGGAGGGCCG CATCGAGATC GTCGGCGAGC CGGATTTGCA CGGCGTGTTT 
CTCAACAGCC ACGTCTCGCC GCGCGATCAC GTCGCGGTCT ATGTGATCCG GCAGTTTCGC 
CAGGATCGTG TGCCCGCGCC CAATCGCGAG ATCGCCGAGA GCGGCTTCTT CGCCGTCGAT 
GCGCTGCCGG CCGGGACCAC GCTGGGAACG CGGTTGCGGA TCGCCGAAGT GCTGGACGGC 
GCCCGGCCGC CCTTGACCTG GCGTCCCGCA GCCGAGCCTT AG
 
Protein sequence
MKAADVLASW PAGRKRHGSG PREDSVVSNM QKLRRALEPA LRRVFHLYWR LARGMTLGVR 
GLVLDDAGRV FLIRHTYVSG WHLPGGGVEV GETFREALCR EVMEEGRIEI VGEPDLHGVF 
LNSHVSPRDH VAVYVIRQFR QDRVPAPNRE IAESGFFAVD ALPAGTTLGT RLRIAEVLDG 
ARPPLTWRPA AEP