Gene RPC_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1336 
Symbol 
ID3973809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1453142 
End bp1454230 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content68% 
IMG OID637924446 
Producthypothetical protein 
Protein accessionYP_531217 
Protein GI90422847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.251495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCTCG GAACAAATCC TAAAATTTCC GTAAGCCGCG GCGAATGTAA CGATTTCGCA 
AGTATCAAAG TGACTAATCG GCCAACCTTA ACCGGAGAAT GCGTCGTGAG TGCAGAGCAG
GGTGACAGCG TCGAAGCCAG CCATGGTGCG ACCGCCGGCG GGGCCTCTCC AGCCGGGACC
GACGTCGCCA AGCTGACGCC GCCCGGCGCG GCTTCGGATC AGCCGCATTC GGACCCGGCG
CATGTCGAGG CGCCCAATCT CGCGCCCGAG CACAGCAACC AGCACAGCGG CCCGAACCAG
CCGGCGAAAG ACGCGCAGCA TGCGGCAGGC TCGCCGCGCG CCGGCCAGAT CACCATCATG
TCGCCGGTGC GCGACTGGGA CGATCGGATC GGCGGCGAAC AGCGGTCTTC CACGGACGCG
CCGCGTAGCG GACTGTTCGG CAAACGCCGC GCGACCGCAC TGGCCGCCGT GGTCGCGATG
GCGGCAATCG CCGGCGCGCT CGGCGGCGCA TTGGCCACCG CGAGCCTCGG CCATTCGTCC
GCGGACAGCA CCGCGCTGAC CAAGCAAACC CAGGCGCTGA ATGACCAGAT CGCGCGGCTC
GATGCCGATT TGGCGGCGCT GAAGGGCAAT GTCGATCATT CGAGCAAGCA GGCCGCGGCG
CAAATCACGC AGCTCGGCAA GACCGGCGAT AAGACCGGCG ACCGCATCGA CAAACTCGAA
AAGGCGCAAG CCGACGCCGC GACCAGGCTC GCGAAAGTGA GCGAGACCGT CGACAAGCTG
AAGACGCCCG CGCCTATGGC CGCAGCGGCG GCCGCGACGC AGGTTGCGGC GAAGGACGCC
ACCGGCTCGC TCGGCGCGGC GAGCGCCAAC CTGACGGCGC CGAAGCCGGA AGTGGCGCGG
CTGCCGACCG TTCCGGGCTG GGTGCTGCAC GACGTCGCCA ATGGCGCGGC AGTGATCGAA
GGCCGCCAGG GCATGTTCGA GGTCTATGCC GGCGATCCGA TTCCCGGTCT CGGCCGAGTC
GACGCCATCC GCCGCCAGGA CGGCCGCTGG GTGGTGGTGA CCAGCCGCGG CTTGATCGTC
GCGCGCTGA
 
Protein sequence
MWLGTNPKIS VSRGECNDFA SIKVTNRPTL TGECVVSAEQ GDSVEASHGA TAGGASPAGT 
DVAKLTPPGA ASDQPHSDPA HVEAPNLAPE HSNQHSGPNQ PAKDAQHAAG SPRAGQITIM
SPVRDWDDRI GGEQRSSTDA PRSGLFGKRR ATALAAVVAM AAIAGALGGA LATASLGHSS
ADSTALTKQT QALNDQIARL DADLAALKGN VDHSSKQAAA QITQLGKTGD KTGDRIDKLE
KAQADAATRL AKVSETVDKL KTPAPMAAAA AATQVAAKDA TGSLGAASAN LTAPKPEVAR
LPTVPGWVLH DVANGAAVIE GRQGMFEVYA GDPIPGLGRV DAIRRQDGRW VVVTSRGLIV
AR