Gene RPC_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1303 
Symbol 
ID3972505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1416889 
End bp1418247 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content69% 
IMG OID637924413 
ProductPUCC protein 
Protein accessionYP_531184 
Protein GI90422814 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGC GACCGCTGTC ATGGTTCGGC ATCGTCCGGA TGGGGCTGGT GCAGACTGGG 
CTTGGCGCCA TCGTCGTGCT CACTACCTCG ACCCTCAACC GGGTGATGGT GGTCGAACTG
GCGATGCCGG CGATGCTGCC GGGCGCGCTG GTCGCCATTC ACTACGCGCT GCAGGCGTTT
CGCCCGGCCT GGGGGCACGG CTCCGACCGC GGCGCCCGGC GCACGCCGTG GATCGTCGGC
GGCATGGCGG TGCTGGCATT CGGCGGATTC CTCGCTGCGG TGGCGACCGC CTGGATGGCC
ACCCAGCCGC TGTTCGGGGT GGCGCTGGCG ATCGTCGCGT TCTGTCTGAT CGGCGGCGGA
GTCGGCGCGG CCGGCACCTC GCTTCTGGTG CTGCTCGCCA AGCGCACCGA TGAAGGCCGC
CGCGCGGCCG CGGCGACCAT CGTCTGGGTG ATGATGATCG CGGGCTTCAT CGTGACCACG
GCGGTCGCCG GGCAGATGCT CGATCCGTTC TCGCCGCTGC GCCTGGTGAT GGTGTCGGGC
GGCGTCTCGA TCGCGGCGAT GGTTTTGACC ATCGCCGGCG TTTGGGGAAT CGAAGGACGG
CGGGTCGCCA CCGCCGCAGC GGCGGAGCCG GCCCGGACCG ACTCCAAAAC CTCGTTCCGC
GCAGCATTCG CCGAAGTCTG GGCCGAGCCG CAGGCGCGCC GCTTTGCGAT CTTCGTCTTC
ATCTCAATGC TGGCCTACAG CGCGCAGGAT CTGATCCTGG AGCCTTTCGC CGGCGTAGTG
TTCGGCTTCA CGCCGGGCGA GACCACCAAG CTGTCGAGCG TCCAACATGG CGGCACGCTG
CTCGGCATGG CGTTGGTGCC GCTGATCGGC GCGGTGTTTC CGAAGTCGCG CGGCAATCTG
CAGGTCTGGA CCATCGGCGG CTGTCTGGCC TCCGCGATGG CGCTGCTCGG CCTTGCCGCC
GCCGCCATCG TCGGCCCGTC CTGGCCGTTG CGCGAGACGG TGTTTGCGCT GGGCGTGACC
AACGGCGCCT ACGCCGTGGC GGCGATCGGC TCGATGATGG CGCTGGTCAG CGCCGGCGGC
GAGCATCGCG AGGGCGTGCG CATGGGATTG TGGGGCGCGG CGCAGGCGCT GGCCTTCGGG
CTCGGCGGGT TTGCCGGCAC GCTGGCCAGC GATGTCGCGC GGTATTTCCT GTCGTCGCCG
GCGCTATCCT ACTCCACCGT ATTCACGAGC GAAGCGGGGC TTTTCATTCT GTCCGCAATC
ATGGCGGTGT GGGTCCATCG CGCGCAGGCC AAAGCCACCC AACGTCGCGG CGATGTTGGC
GAACTCTCCA CAGCAGCAGT CGCCGGGGGA CTGAGATGA
 
Protein sequence
MTMRPLSWFG IVRMGLVQTG LGAIVVLTTS TLNRVMVVEL AMPAMLPGAL VAIHYALQAF 
RPAWGHGSDR GARRTPWIVG GMAVLAFGGF LAAVATAWMA TQPLFGVALA IVAFCLIGGG
VGAAGTSLLV LLAKRTDEGR RAAAATIVWV MMIAGFIVTT AVAGQMLDPF SPLRLVMVSG
GVSIAAMVLT IAGVWGIEGR RVATAAAAEP ARTDSKTSFR AAFAEVWAEP QARRFAIFVF
ISMLAYSAQD LILEPFAGVV FGFTPGETTK LSSVQHGGTL LGMALVPLIG AVFPKSRGNL
QVWTIGGCLA SAMALLGLAA AAIVGPSWPL RETVFALGVT NGAYAVAAIG SMMALVSAGG
EHREGVRMGL WGAAQALAFG LGGFAGTLAS DVARYFLSSP ALSYSTVFTS EAGLFILSAI
MAVWVHRAQA KATQRRGDVG ELSTAAVAGG LR