| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1252 |
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| Symbol | |
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| ID | 3972045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1368560 |
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| End bp | 1369726 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637924362 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_531133 |
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| Protein GI | 90422763 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00385086 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAAGA GCAAGACGGT CGCGCATACT CGCCTTTTCA CTCGGCCTCC GGTCCACACG
TCGCCCGCGA CCATACCTTT TTCGTTTCTC GAACAGACCA TTGAGAGCGG CGGCCTGGGC
TTTGCAAAGT TCGATCCGTT ATCAGGAAAG CTGGTGTCTA CGAACCCGCG CTTCTGCCAC
ATGCTCGGCT ACGCGACGGG GGAGTTGTGC GACGGCAGTT TTACGTCCAA GTCTCTTACG
CATCCCGACG ATATCGAACG GTGTAACGGA GAATTGCAGC GGCTGTTTCG CGGCGAAATC
GACTCTTACA CGATCGACAA ACGATTTTTG CGAAAGGACG GCTCGATCTT GCCGGCGCGC
GTCACGGTGA CCGCGCTGGA GCGCGACGGC GACAACTGCG CCGCCGAGAT GATCGGCGTG
ATCAGCGCGC CGGCGGATAC CAAGTCAACC GACTATCCGG CGCCGCGCCG CGATCAGCCG
CGCAGCGTGG CGTTCTGGAC CAAGGATTTT CGCACCAAAT CGGCAAGCTG CTCGGAGGGG
CTGAACATCC TGCTCGGCCG CAGCCTGAAT GGTCCACCGC CGACCTTCGA AGATTTCGTT
GCGCAGCTTC ACCCGGAGGA CCGGCCGCGC GTCCTTGAAG AGGCGCGACG GGTCAGCAAC
GGCATGGTCT ACACCAGCGA GCATCGCATC GTTCGGCCGA GCGGAGAGAT TCGCTGGGTC
AACCAGACGG TGATGCCGGT GTTCGACGAT CTCGACGAAG TCGTCGGCCT GGTCGGCGTC
AGCCTCGACG TCACCGAAGC CAAGCGCGGC CAGAAATACA ATTCGGCGAC CAGCACGGTG
CAGGCGGTGA AGCGCTACGT CGATCAGAAC TGGGACAAGC CGCTCAACAT CGCGGCGTTG
GCCGCAGCCG CCAGTGTCAA CACCCGCACG CTGTTCAAGC ACTGCAAGCT GGCCTGGGGC
TTCACGCCGA ACGAGTACAT CAAGCGGGTG CGGCTGAACC ACGCCCGGGC GCTGTTGCAG
ATGCCGGAGA GGTCCACCAC CGTGCTCGGC ACCGCGCTGA AATGCTGCTT CCAGAACCAG
GGGCATTTTG CCCGCGACTA TCGGCTGGCG TTCGGCGAGC GGCCGTCGGA AACGTTGGAG
CGCGCCCGCC AGCGCCGCGG GCGCTGA
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| Protein sequence | MIKSKTVAHT RLFTRPPVHT SPATIPFSFL EQTIESGGLG FAKFDPLSGK LVSTNPRFCH
MLGYATGELC DGSFTSKSLT HPDDIERCNG ELQRLFRGEI DSYTIDKRFL RKDGSILPAR
VTVTALERDG DNCAAEMIGV ISAPADTKST DYPAPRRDQP RSVAFWTKDF RTKSASCSEG
LNILLGRSLN GPPPTFEDFV AQLHPEDRPR VLEEARRVSN GMVYTSEHRI VRPSGEIRWV
NQTVMPVFDD LDEVVGLVGV SLDVTEAKRG QKYNSATSTV QAVKRYVDQN WDKPLNIAAL
AAAASVNTRT LFKHCKLAWG FTPNEYIKRV RLNHARALLQ MPERSTTVLG TALKCCFQNQ
GHFARDYRLA FGERPSETLE RARQRRGR
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