| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1247 |
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| Symbol | |
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| ID | 3972040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1361377 |
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| End bp | 1363017 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637924357 |
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| Product | hypothetical protein |
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| Protein accession | YP_531128 |
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| Protein GI | 90422758 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000443968 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACGGGC AATCCCAGAG CCGCGGCTGG AAGCAGCGCT TGGCAACGCC GGCGCGCTGG
CTCGTCGCCA TCGCCGCCGT CATCGCCATC GCCACAGCGC TGTGGCATTT GCAGCAGGCG
GAGAGCGGGC TGCGGATCAC CACGGCCACC GTCGGCGAAA CCCCGGTGAC GGTGTATCGG
CCGCAGGCCG AAGGCCCCGC CCCGGTGGTG GTGATTGCGC ATGGCTTTGC CGGCTCGCAG
CAATTGATGC AGCCGTTCGC GGTGACGCTG GCGCGGAACG GCTATGTCGC GGTGACCTTC
GATTTCATCG GCCACGGCCG CAATCCGGTG GCGATGAAAG GCGACGTCAA CGAGCCGACC
AAGATTACCG GCGTCTTGGT CGATGAACTC GGCCGGGTCG CCGACTACGC CAAGACCCTG
CCCGACAGCG ACGGCCGACT GGCGGTGCTC GGCCATTCGA TGGCCTCCGA CATCGTGGTG
CGCTACGCGA TGGCGCATCC TGAGGTCACC GCCACGGTGG CGGTCTCGGT GTTCTCGCCG
GTGGCGACCG CGACCAGCCC GCGCAACCTG TTGGTGATCG TCGGCGCGCT GGAGCCGAAC
ATGCTGATCA ACGAAGGCTT GCGCATCGTC AACCTGGCCA GCGGCGGCGG CGCGGTGGCC
GGCCAAAGCT ATGGCGACTT CAAGGACGGC AGCGCGCGGC GCCTGGCGCT GTCCTCGGGC
GTCGAACATA TCGGCGTGCT GTACAGCCGC GACAGCATGG CGGAATCGCT GCAATGGCTG
AACCAGGCGT TCGGCCATCA GGGCTCGGGC TTTCTCGACC GCCGCCCGCC CTTGCTGGCG
CTGTTGTTCG GCGGACTGAT CGCGCTGGCC TGGCCGTTGT CGCGGCTGCT GCCGAAAGCG
GCAGAAGCGC CGATGGGCGC CAACTTACGC TGGAAGCCGC TGCTCGCCGC AGCCATCGTG
CCGGCGCTGC TGACGCCGCT GATCCTGTGG AAGATGCCGA CCGACTTCCT GATCATCCTG
CTCGGCGATT ATCTGACGCT GCATTTCCTG GTCTATGGCC TGTTGACCGC GCTGATCCTG
CGGTTCGGCA ACCGCGGCAA GCCGCTCGCC GGGCAAACCT TGCTGTGGCC CGGCCAATCG
CGGCACCGCC ATGGCAAAGC CACCTGGACG CCCGGCACCT CCAATCCGAT CACCGCGCAA
GCCTCGCTGA CCTACGTCGC CATCGCGGCG CTCGCGGTCG GCGCCTACAA CATCATCGCG
ATCGGGCTGC CGCTCGACCG CTACGTGTTT TCGTTCCATC CGATCGCGCC GCGGATCCAT
CTGATCCTCG CGGTGGCCTG CGGCACCGTG CCGTATTTCA TCACCGCGGA ATGGCTGACC
CGCGGCGACG CCAGGCGCGG CGCCTATGCG CTGACCAAGT TCTGTTTCCT CGCCTCGCTG
GCGATCGCGG TGGCGCTGAA CCTGTACAAA TTGTTCTTCC TGATCATCAT CGTGCCGGCG
ATCTTGCTGT TATTCCTGGC GTTCGGGCTG ATCAGCCATT GGAGCTACAA GGCCACCAAC
CATCCGTTGC CCGGCGCGCT CGCCAACGCC GCGGTGTTCG CCTGGGCGAT CGCGGTGACG
TTTCCGATGG TGATCCGCTG A
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| Protein sequence | MHGQSQSRGW KQRLATPARW LVAIAAVIAI ATALWHLQQA ESGLRITTAT VGETPVTVYR
PQAEGPAPVV VIAHGFAGSQ QLMQPFAVTL ARNGYVAVTF DFIGHGRNPV AMKGDVNEPT
KITGVLVDEL GRVADYAKTL PDSDGRLAVL GHSMASDIVV RYAMAHPEVT ATVAVSVFSP
VATATSPRNL LVIVGALEPN MLINEGLRIV NLASGGGAVA GQSYGDFKDG SARRLALSSG
VEHIGVLYSR DSMAESLQWL NQAFGHQGSG FLDRRPPLLA LLFGGLIALA WPLSRLLPKA
AEAPMGANLR WKPLLAAAIV PALLTPLILW KMPTDFLIIL LGDYLTLHFL VYGLLTALIL
RFGNRGKPLA GQTLLWPGQS RHRHGKATWT PGTSNPITAQ ASLTYVAIAA LAVGAYNIIA
IGLPLDRYVF SFHPIAPRIH LILAVACGTV PYFITAEWLT RGDARRGAYA LTKFCFLASL
AIAVALNLYK LFFLIIIVPA ILLLFLAFGL ISHWSYKATN HPLPGALANA AVFAWAIAVT
FPMVIR
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