| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1192 |
|---|
| Symbol | |
|---|
| ID | 3969147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1305386 |
|---|
| End bp | 1305877 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637924303 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_531074 |
|---|
| Protein GI | 90422704 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAACC GATCAAATCA TGGCACTGGA TTGCGCATGG ACGAGCTCGA CCGCAAGCTA
CTGCGCATTC TGCAAGACGA TGCCTCGATC CAGAATCAGG ATCTCGCGGC CCGGGTCGGG
CTGTCGCCGT CGCCCTGCCT GCGCCGGGTC AAGGCGTTGG AGGCGGCCGG CGTGATCAAG
CGCTACGTCG CGCTGGTCGA TGGTCCTGCG GTCGGCACCG GCTTCATCGC CTTTGTCGAG
GTGCGGCTGG AGAAGCAGGT CGAGGCCTAT TCGAGCCGCT TCGAATCGGT GGTGCTGACC
CGGCCGGAGG TTATCGACTG CGCCTTCGTC ACCGGCGAGT TCGATTATCT CTTGAAGATC
GCGGTGGCCG ATCTCGACGA GTTTCACCGC TTTCTCACCC AGGTGCTGGC GCGCATCGAA
GGCGTCGCCA ACACCCGCAG CATCATCCCG GTGAAGCGGA TCAAGGAAAC CACGGCGATC
AAGATCGGGT GA
|
|---|
| Protein sequence | MLNRSNHGTG LRMDELDRKL LRILQDDASI QNQDLAARVG LSPSPCLRRV KALEAAGVIK
RYVALVDGPA VGTGFIAFVE VRLEKQVEAY SSRFESVVLT RPEVIDCAFV TGEFDYLLKI
AVADLDEFHR FLTQVLARIE GVANTRSIIP VKRIKETTAI KIG
|
|---|
| |