| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1163 |
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| Symbol | |
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| ID | 3969483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1268060 |
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| End bp | 1270603 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637924274 |
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| Product | pyruvate formate-lyase |
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| Protein accession | YP_531045 |
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| Protein GI | 90422675 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1882] Pyruvate-formate lyase |
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| TIGRFAM ID | [TIGR01774] pyruvate formate-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.948697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAA AAGGTTTCTC CAAGCCGACC GAAAGGGTCA TGCGGCTGAA GAACGTCATC
CTGAACGCCA AGCCGTTCGT GGAGTCGGAA CGCGCCGTCC TGGTCACCGA TGCCTACAAG
GAAACCGAAG GCCTGCCGGC CATTCTGCGC CGCGCCAAGG CCGCGGAGAA GATCTTCAAC
AACCTGCCGG TGACGATCCG CGCGGACGAG TTGATCGTCG GCGCGATTAC TAAGCGTCCG
CGCTCCACCG AGATCTGCCC GGAATTCTCG TTCGACTGGG TCGAGAAGGA ATTCGAGACC
ATGGCCACCC GCGTGGCCGA TCCGTTCCAG ATCCCCAAGG AGACCGCGGC CGAACTTCAT
GAGGCCTTCA AGTATTGGCC CGGCAAGACC ACCAGCGATC TTGCGTCCTC CTACATGTCG
CAGGAAGCCA AGGACTGCAT CGCCGCCGGC GTATTCACGG TCGGCAACTA CTTCTATGGC
GGTGTCGGCC ACGTCTGCGT CGATTACGGC AAGGTGTTGA AGATTGGTTT CCGCGGCATC
ATCACTGAAG TCGTGCTGGC GATGGAGAAG CTTGACCGGA TGGATCCGGG CTATATCAAG
AAGCAGCAGT TCTACAACGC GGTGATCATT TCCTACACCG CCGCCATCAA TTTCGCGCAC
CGCTATGCGG TCAAGGCCGA GGAGCTGGCG CAGACCGAAT CCAACGCCAC GCGCAAGGCC
GAACTGCTGC AGATCGCCAA GAATTGCGCC CGTGTTCCGG AATATGGCGC GAGCAATTTC
TACGAAGCCT GCCAGTCGTT CTGGTTCCTG CAGGCCCTGC TGCAGATCGA ATCCAGCGGC
CACTCGATCT CGCCCGGCCG CTTCGATCAG TACATGTATC CATTCCTCGC CGCCGATAAG
AGCATCTCGC GGGAGTTCGC GCAGGAACTG ATCGACTGCA TCTGGATCAA GCTCAACGAC
GTCAACAAAA CCCGCGACGG CGGTTCGGCT CAGGCCTTTG CCGGCTACGC GGTGTTCCAG
AATCTCTGCG TCGGCGGCCA GACCGAAGAA GGTCTCGACG CCACCAACGA CGTCTCCTTC
ATGTGCATGG AAGCGACCGC GCATGTGGCG CTGCCGGCGC CCTCGTTCTC GATCCGCGTC
TGGCAGGGCA CGCCCGACGA TTTCCTTTAC CGGGCCTGCG AAGTGGTCCG CCTCGGGCTT
GGCGTTCCCG CCATGTACAA CGACGAAGTC ATTGTCCCTT CGCTGCAAAA CCGCGGCGTC
TCGCTCCGCG ACGCCCGCGA CTACGGCATC GTCGGCTGTG TCGAGCCGCA GGCGATCCAC
AAGACCGAGG GCTGGCATGA CGCCGCGTTC TTCAACGTCG CCAAGGTTCT CGAAATCACC
CTGAATAACG GCCGGGTCGG CGACAAGCAG GTCGGGCCGG CGTCCGGAGA ACTTCTCAGC
TTCCGCTGCA TCGACGATGT CTTCGCCGCA TTCCAAAAGC AGATCGAATA CTTCGTGCGC
TACCTCGTCG AAGCCGATAA CTGCGTCGAT CTCGCGCATG GGGAACGCTG CCCGTTGCCG
TTCGTTTCGG CGCTGGTCGA AGACTGCATC GGCCGCGGCA AGTCGCTGCA GGAAGGCGGC
GCGCTTTACA ACTTCACCGG CCCGCAGGCC TTCGGCGTCG CCGACACCGG CGACTCGGTC
TACGCCATCC AGAAGAACGT GTTCGAGGAC AAGAAGATCA CCCTCGGCGA ATTGAAAGCG
GCGCTCGACG CCAATTTCGG TCGGCCGGTG GGCGAGAGCG CGCATGCCGA CGCGGGAACC
AACTACACCG AGGAACAGGT GTTCGCTGCG GTGAAGAAGG TGCTGAACAG CAGCGGCTCG
ACCGATGTCT CGGCGCTCAA GGGCAAGGTC TACAGCGCAC TGGCTGGGGC CAATGGCGCG
AAGAGCGGCG GTGCCTCGTC GAGCTATGAC GCGCTGCATC GCTTGCTCGA AGCCACCCCG
GCGTTCGGCA ACGATATCCA CGAAGTCGAC ATGGTCGCCC GCAGATGCGC CCAGATCTAT
TGCCTCGAAG TCGAGAAATA CACCAACCCG CGCGGCGGCC AATTCCAGGC GGGGATCTAT
CCGGTGTCGG CGAACGTGCT GTTCGGCAAG GACGTCGCCG CGCTGCCGGA CGGCCGGTTC
GCCAAGGCAC CCTTGGCTGA CGGCGTTTCT CCTCGTCAGG GCAAGGACGT CAATGGTCCG
ACGGCGGCGG CCAACTCGGT CGCCAAGCTC GACCATTTCA TCGCCTCGAA CGGCACGCTC
TACAATCAGA AGTTCTTGCC TGCGGCGCTC GCCGGCGACA GCGGATTGCA GAACTTCGCC
TCGCTGGTCC GCAGTTACTT CGACCACAAG GGCATGCACG TGCAGTTCAA CGTGGTGGAT
CGACAGACGC TGCTGGATGC GCAACGCGAG CCCGAGAAGC ACAACGACCT CGTCGTTCGT
GTCGCCGGCT ACAGCGCGCA GTTCGTGGTG CTCGCCAAGG AAGTGCAGGA CGACATCATC
AGCCGCACCG AACAGACCTT GTAG
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| Protein sequence | MIEKGFSKPT ERVMRLKNVI LNAKPFVESE RAVLVTDAYK ETEGLPAILR RAKAAEKIFN
NLPVTIRADE LIVGAITKRP RSTEICPEFS FDWVEKEFET MATRVADPFQ IPKETAAELH
EAFKYWPGKT TSDLASSYMS QEAKDCIAAG VFTVGNYFYG GVGHVCVDYG KVLKIGFRGI
ITEVVLAMEK LDRMDPGYIK KQQFYNAVII SYTAAINFAH RYAVKAEELA QTESNATRKA
ELLQIAKNCA RVPEYGASNF YEACQSFWFL QALLQIESSG HSISPGRFDQ YMYPFLAADK
SISREFAQEL IDCIWIKLND VNKTRDGGSA QAFAGYAVFQ NLCVGGQTEE GLDATNDVSF
MCMEATAHVA LPAPSFSIRV WQGTPDDFLY RACEVVRLGL GVPAMYNDEV IVPSLQNRGV
SLRDARDYGI VGCVEPQAIH KTEGWHDAAF FNVAKVLEIT LNNGRVGDKQ VGPASGELLS
FRCIDDVFAA FQKQIEYFVR YLVEADNCVD LAHGERCPLP FVSALVEDCI GRGKSLQEGG
ALYNFTGPQA FGVADTGDSV YAIQKNVFED KKITLGELKA ALDANFGRPV GESAHADAGT
NYTEEQVFAA VKKVLNSSGS TDVSALKGKV YSALAGANGA KSGGASSSYD ALHRLLEATP
AFGNDIHEVD MVARRCAQIY CLEVEKYTNP RGGQFQAGIY PVSANVLFGK DVAALPDGRF
AKAPLADGVS PRQGKDVNGP TAAANSVAKL DHFIASNGTL YNQKFLPAAL AGDSGLQNFA
SLVRSYFDHK GMHVQFNVVD RQTLLDAQRE PEKHNDLVVR VAGYSAQFVV LAKEVQDDII
SRTEQTL
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