| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1160 |
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| Symbol | |
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| ID | 3969518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1264023 |
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| End bp | 1264913 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637924271 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_531042 |
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| Protein GI | 90422672 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.340867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA TCTTTGGACC ATTCGTCGCC ATCGTCACGC CGTTCGACGC CAACGAGGAC
ATCAGCGAAC CCGCACTGCG ACGCCAGGTC GATCGCCAGG CAAGCGCCGG CAACGGCGTG
TTCTGCGCCG GCACCAATGG CGAGTTCTAC GCTTTGTCGT TCCAGGAAAA ACTGCGCGTC
GCCGAAATCT GCGTGGAGGC GGCCGCCGGC CGCGTTCCGG TGCTGGCGCA CATCGGCGAA
ATCTCGACGC ACGAGACGAT CGCGCTCGGC AAACTGATCG AGAAGCTCGA CGTCAAGGCG
ATGTCGGCGA TTACGCCATC CTTCATCGCC TGTTCGCAAG CAGAGCTGAT CAATCACTAT
CGTCGGGTCG CCGATGCGAT GGCGAAGCCG GTCTATCTCT ACAATATTCC CGCCCGCACC
GGGAATACGA TCCAGCCGGA CACGGCGCGC ATCCTCGCCG ATCATCCGAA CATCATCGGC
ATCAAGGACA GCGCGGGATC GCAGGAAAGC CTCGATGCCT TTCTGACGAT CGCGCGTGAG
CGCGAGAATT TCGACGTGCT GGTCGGCGCG GATTCGCTTG TTCTGCACGG ACTTCAGAAC
GGCGCCGCCG GCTGCATCTC GGGGCTCGGT AACATCTCGC CGGTGACGCT GAACGCGATT
CATTCGTCGT TCGTCGCCGG CGACGCGGCG GCCGCGGCGA AGCACCAGGA TCATTACTCG
AGCTTGCGCA AGCAACTTTA CGCCCACGGC TTCCCGCCGG CGCTGGTGAA GCGGGCGCTG
CGTCTTGCGA TGCCCGAGGT CGGGGCGAGC CGCGCTCCGG TGCTGATCTC AGACGAGGTC
AACGACAAGG TGCGCGAGAT TTCAAACCGC TTCGTCGAAG CAGCCAATTG A
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| Protein sequence | MSKIFGPFVA IVTPFDANED ISEPALRRQV DRQASAGNGV FCAGTNGEFY ALSFQEKLRV
AEICVEAAAG RVPVLAHIGE ISTHETIALG KLIEKLDVKA MSAITPSFIA CSQAELINHY
RRVADAMAKP VYLYNIPART GNTIQPDTAR ILADHPNIIG IKDSAGSQES LDAFLTIARE
RENFDVLVGA DSLVLHGLQN GAAGCISGLG NISPVTLNAI HSSFVAGDAA AAAKHQDHYS
SLRKQLYAHG FPPALVKRAL RLAMPEVGAS RAPVLISDEV NDKVREISNR FVEAAN
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