| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1157 |
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| Symbol | |
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| ID | 3969515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1260621 |
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| End bp | 1261379 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924268 |
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| Product | GntR-like |
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| Protein accession | YP_531039 |
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| Protein GI | 90422669 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00396004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACA CAACCGAATC CGAGAACGCC GCGCCGGAGC GGGCGCCGGC CGGGCGCAGC
CCGTTGGCGC AGAACGTCTT TCAAGCGCTT CGCGCGCAGA TCACCGGCGG ACAATTGCGG
CCGGATCAGA AACTGCCGGG GGAGCACGAA CTCGCCGAGA CCTATCTGGT ATCGCGCCCG
ATCGTGCGCG AAGCGCTACG GCAACTCCGG GAGCAGCGGC TGATCTATTC GCGGCGTGGC
GCCGGTAGCT TCGTGGTCGC GCGGCCCGAT CTCGGCGCCG AGCAGCCCGC GGTCGGATTC
GCGCCGGTCG AAACCATCGC CGACATCCAG CGCTGCTACG ACTTCCGCCT GACCATCGAA
CCCGATCACG CTTATTGGGC GGCGTCGCGT TGGAATGCCG AAGCGCTCGA CGAGATCGCC
ACCGCGCTCG ACCTCATGCG CGACGCAACC GTCGCCCGTC TGCATCGCGA GGACGCGGAT
TTCGCCTTTC ACCTGGCGAT CGCGCAGGCC ACCAACAATC ACTACTACGT CTCTTCGATG
ACGGCCTTGA AGGCCCACAT CTTTGTCAGC ATGAAATTCC ACGGCAATTC GGTGATCGTG
GCCAAGGAAC GCCTGGAGAA CGTGTTCGCC GAGCACTGCG GCATCTTCGA AGCGATCCGC
GCCCGCGACT CCGACCGCGC GCGCGAGTTG ATGCGCCGCC ACCTCGAAGG CTCGCGCGAC
CGGCTGTTCG AAGGTCGCAT GCTGGATTTG TCGCTCTGA
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| Protein sequence | MTNTTESENA APERAPAGRS PLAQNVFQAL RAQITGGQLR PDQKLPGEHE LAETYLVSRP
IVREALRQLR EQRLIYSRRG AGSFVVARPD LGAEQPAVGF APVETIADIQ RCYDFRLTIE
PDHAYWAASR WNAEALDEIA TALDLMRDAT VARLHREDAD FAFHLAIAQA TNNHYYVSSM
TALKAHIFVS MKFHGNSVIV AKERLENVFA EHCGIFEAIR ARDSDRAREL MRRHLEGSRD
RLFEGRMLDL SL
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