Gene RPC_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1154 
Symbol 
ID3969511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1257052 
End bp1257528 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content66% 
IMG OID637924264 
Productthioesterase superfamily protein 
Protein accessionYP_531036 
Protein GI90422666 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.576417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACC ATTCCGACAA ACCTGCCGAC GCCTTCGCCT GGGACTATCC CGCGCCATTC 
ACGCTTCCCG TGCAGCCCGA GGCCGCCGAT ATCGACGGGC TCGGCCACAC CAACAACGCG
GTCTATGTGC GCTGGTGCGA GGCGATCGGC TGGGCGCATT CCGAGGCGCT CGGCCTCGGG
TTGATCAATT GGCAAAAGCT CGATCGCGCG GTGGCGATCC GGCGCGGCGA ATACGACTAT
CTGCTGCCGA GCGCGCAAGG CGACGCGCTC ACGCTCGGCA CCTGGATCAC CGCCAGCGAC
GGCAAGCTGA CCATGGAGCG GCGGTTTCAA CTGATCCGGC CGCGCGACGG CGCCATCATC
ATGCGCGGGC GCTGGCAAAT GGTCTGCATC GAAATCAGTA GCGGCCGGCC GCGGCGGCTG
CCGCCGGAGT TTCTGCAGAT CTATATGCCG GCGTTGGTCG AGGGCGGCGC GACGTAG
 
Protein sequence
MQDHSDKPAD AFAWDYPAPF TLPVQPEAAD IDGLGHTNNA VYVRWCEAIG WAHSEALGLG 
LINWQKLDRA VAIRRGEYDY LLPSAQGDAL TLGTWITASD GKLTMERRFQ LIRPRDGAII
MRGRWQMVCI EISSGRPRRL PPEFLQIYMP ALVEGGAT