Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1154 |
Symbol | |
ID | 3969511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1257052 |
End bp | 1257528 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637924264 |
Product | thioesterase superfamily protein |
Protein accession | YP_531036 |
Protein GI | 90422666 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.576417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACC ATTCCGACAA ACCTGCCGAC GCCTTCGCCT GGGACTATCC CGCGCCATTC ACGCTTCCCG TGCAGCCCGA GGCCGCCGAT ATCGACGGGC TCGGCCACAC CAACAACGCG GTCTATGTGC GCTGGTGCGA GGCGATCGGC TGGGCGCATT CCGAGGCGCT CGGCCTCGGG TTGATCAATT GGCAAAAGCT CGATCGCGCG GTGGCGATCC GGCGCGGCGA ATACGACTAT CTGCTGCCGA GCGCGCAAGG CGACGCGCTC ACGCTCGGCA CCTGGATCAC CGCCAGCGAC GGCAAGCTGA CCATGGAGCG GCGGTTTCAA CTGATCCGGC CGCGCGACGG CGCCATCATC ATGCGCGGGC GCTGGCAAAT GGTCTGCATC GAAATCAGTA GCGGCCGGCC GCGGCGGCTG CCGCCGGAGT TTCTGCAGAT CTATATGCCG GCGTTGGTCG AGGGCGGCGC GACGTAG
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Protein sequence | MQDHSDKPAD AFAWDYPAPF TLPVQPEAAD IDGLGHTNNA VYVRWCEAIG WAHSEALGLG LINWQKLDRA VAIRRGEYDY LLPSAQGDAL TLGTWITASD GKLTMERRFQ LIRPRDGAII MRGRWQMVCI EISSGRPRRL PPEFLQIYMP ALVEGGAT
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