Gene RPC_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1144 
Symbol 
ID3969501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1243798 
End bp1244655 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content67% 
IMG OID637924254 
Producthypothetical protein 
Protein accessionYP_531026 
Protein GI90422656 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.153018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.273143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGGG GTGTCTCGAT CGCGACGGCG ACCGCGCTGA TCGCCGCGGC GCTGATCTCC 
GGCGACGTCG CCGGCGTCGC CGCGCCCGCC GCCTCGCCGC CGGTGCCCGC GGCCGGCGAG
GAGCTCAAGC CGGTCGACGT CGAACTGGTG CTGGCGCTCG ACGTCTCCTA CTCGATGGAT
CTCGACGAAT TGGCGCTGCA GCGCGAAGGC TACGCCCAGG CGATCGTCTC CAAGGAATTC
CTGCAGGCGC TGAAGTCGGG CCCGACCGGC AAGATCGCGG TGACGATGTT CGAATGGGCG
GCCTCCGGCG ACCAGAAGCT GATCATTCCC TGGGTGGTGA TCGACGGCCC GGAATCCGCC
GACGCGGTGG CCGCCGAAAT CCTCAAATCG CCGATCAGGC GCGCCTCGCG CACCTCGATC
TCCGGCGCGA TCGCTTTCGC GATCCCGCTG ATCGAGGACA ATCCCTATCA CGGGCTGCGC
CGGGTGATCG ACATCTCCGG CGACGGCCCC AACAACAACG GCATGCCGGT CACCATGGCG
CGCGACGCCG CGCTGGAGAA GGGCATCATC ATCAACGGCC TGCCGATCAT GGTGAAGGAG
CCGTCCTATT CGACGATGGA TATCGACAAT CTCGATTACT ACTACGAGGA CTGCGTGATC
GGCGGGCCCG GATCGTTCGT CGTCACTATC AAGCACCGCG ACAAATTCAA GGAGGCGATC
CACACCAAGC TGGTGATGGA AGTCGCCGGC CGGGTGCCGG AGCATCGCGT GGTGCCGGTG
GCGGAGCAAA CGCCCGCCGA GCCGCGGGTG TCGTGCATGG TCGGCGAGCG GATCTGGCAG
GACAGGTGGG GACGGTGA
 
Protein sequence
MRWGVSIATA TALIAAALIS GDVAGVAAPA ASPPVPAAGE ELKPVDVELV LALDVSYSMD 
LDELALQREG YAQAIVSKEF LQALKSGPTG KIAVTMFEWA ASGDQKLIIP WVVIDGPESA
DAVAAEILKS PIRRASRTSI SGAIAFAIPL IEDNPYHGLR RVIDISGDGP NNNGMPVTMA
RDAALEKGII INGLPIMVKE PSYSTMDIDN LDYYYEDCVI GGPGSFVVTI KHRDKFKEAI
HTKLVMEVAG RVPEHRVVPV AEQTPAEPRV SCMVGERIWQ DRWGR