Gene RPC_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1138 
Symbol 
ID3969533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1237993 
End bp1238970 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content68% 
IMG OID637924249 
Productchaperone DnaJ-like 
Protein accessionYP_531021 
Protein GI90422651 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.385476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGACC CCTATGAGGT CCTGGGGGTG CAGCGAGATG CCAGCGCTGC GGCCATCAAG 
AGCGCCTATC GCAAACTCGC CAAGAAGCAT CACCCGGACA ACAACAAGAA CGACCCGAAA
TCCGCGTCGC GGTTTTCCGA GGTCAATTCC GCCAATGAGA TCATCGGCGA CGAGGTCAAG
CGCAAGCAGT TCGATCGCGG CGAGATCGAT GCCGAGGGCA AGCCGCGCTT TCAAGGCTTT
CCCGGCGGCG GCCGCGGCGG GCGCGGCGCG TCGCCCGGCG GCGGCTTCGA GCAGCACAAT
TTCCGCACCG GTCCGGGCGG CCCCGGCGGC TTCGGCGGCG GCGGCGGCGG TTTCGAGGAC
ATCCTCAACA GCATGTTCGG CGGCGCGGCC GGCGGTGCCC GCGGGCCGCG CGGCGGCCAG
GCGTTCGATT TCGACACCGG AGGACTGGCG GCCGATCTCG ACCTCACCGT GTCGATGACG
GTATCGCTGG AAGATTCGGT CAAGGGCGTC GAGAAGCGGG TGCGGCTGCC GTCGGGCAAG
GAGCTCAACG TCAAGGTGCC GGCCGGCGTC ACCTCGGGTC AGCAGATCCG GCTGAAGGGC
CAGGGCGAGA GCGCCCCCGG CCATCGCCCC GGCGACCTGT TGATCACCGT CAGCATCGCC
AGCCATCCAT TCTTCAAGGT CGACGGCAAC GACCTGCGGG TCGAGCTGCC GATCACGCTG
TACGAGGCGG TGCTCGGCGG CAAGGTGCGG GTGCCGACGC TGACCGGCGC GATCGAATTG
TCGGTGCCGA AAAACACCTC CAGCGGGCGG ATCTTCCGGC TCAAGGGCAA GGGCATCCCG
AAGCAGGGCG GCGCCGCCGG CGACCTGTTC GTCACCACCA AGATCGTGCT GCCGGACGGC
CACGACGCCG AGCTGGAAGC CTTGATGGAA AAATGGCGGG ACCATCGCCC CTACCATCCG
CGCAGCGATT TGGGCTGA
 
Protein sequence
MRDPYEVLGV QRDASAAAIK SAYRKLAKKH HPDNNKNDPK SASRFSEVNS ANEIIGDEVK 
RKQFDRGEID AEGKPRFQGF PGGGRGGRGA SPGGGFEQHN FRTGPGGPGG FGGGGGGFED
ILNSMFGGAA GGARGPRGGQ AFDFDTGGLA ADLDLTVSMT VSLEDSVKGV EKRVRLPSGK
ELNVKVPAGV TSGQQIRLKG QGESAPGHRP GDLLITVSIA SHPFFKVDGN DLRVELPITL
YEAVLGGKVR VPTLTGAIEL SVPKNTSSGR IFRLKGKGIP KQGGAAGDLF VTTKIVLPDG
HDAELEALME KWRDHRPYHP RSDLG