Gene RPC_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1101 
SymbolflgH 
ID3969574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1203743 
End bp1204447 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content64% 
IMG OID637924212 
Productflagellar basal body L-ring protein 
Protein accessionYP_530984 
Protein GI90422614 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.21807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.536314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGA TGCGATTGCC CGTTGCGGTG ACGGCGTGCC TGGCCTTGGC GGGCTGCGCC 
AACAATCTGG CCGAACTCGG CCAAGCGCCG GCGATGTCGC CGATCGGCCA GGGCTTGTAT
GCCGACGCCC GCGCGATTCC GGTCGAGCCG CGCAGCCGCT ACGCGCAAAA TCGCTACTCG
CTATGGAACG AGCGCAGGGA CCTCTATCGC GATCCGCGGG CGTCGCGGGT CGGCGACCTG
CTGACCGTCA CCATCTCGAT GAACGACAAG GCGACGCTCG ACAACAAGAC CGATCGGTCG
CGGGATTCCG AAACCAAATT CAAAACCAAT TATCTCGCCG AGTTTCTGCC CTGGTCGAGC
AAGGGTAAGC TGGAAGCCAA TGTCGATTCG CAAACCTCGA CCAAAGGCAC GGGCAAGATC
GATCGCACCG AAGAGGTCAA GTTCTCGGTT GCCGCGGCGG TGGTCGACGT GCTGCCGAAC
GGCAATCTGC TGATCGCGGG CTCGCAGGAA GTGCGGGTGA ACTACGAGAT GCGCGTCCTG
CACGTCGGCG GCATCGTCCG GCCGCTCGAC ATCACCCGCA ACAACACCAT CGCCTACGAG
AAAGTGGCGG AGGCGCGAAT TTCCTATGGC GGCCGCGGGC GCCTGATGGA GGTGCAGCAG
CCGGCGTGGG GTCACCAGGT CTACGATCAG GTGGTGCCGT TCTAG
 
Protein sequence
MTLMRLPVAV TACLALAGCA NNLAELGQAP AMSPIGQGLY ADARAIPVEP RSRYAQNRYS 
LWNERRDLYR DPRASRVGDL LTVTISMNDK ATLDNKTDRS RDSETKFKTN YLAEFLPWSS
KGKLEANVDS QTSTKGTGKI DRTEEVKFSV AAAVVDVLPN GNLLIAGSQE VRVNYEMRVL
HVGGIVRPLD ITRNNTIAYE KVAEARISYG GRGRLMEVQQ PAWGHQVYDQ VVPF