Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1101 |
Symbol | flgH |
ID | 3969574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1203743 |
End bp | 1204447 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637924212 |
Product | flagellar basal body L-ring protein |
Protein accession | YP_530984 |
Protein GI | 90422614 |
COG category | [N] Cell motility |
COG ID | [COG2063] Flagellar basal body L-ring protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.21807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.536314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCTGA TGCGATTGCC CGTTGCGGTG ACGGCGTGCC TGGCCTTGGC GGGCTGCGCC AACAATCTGG CCGAACTCGG CCAAGCGCCG GCGATGTCGC CGATCGGCCA GGGCTTGTAT GCCGACGCCC GCGCGATTCC GGTCGAGCCG CGCAGCCGCT ACGCGCAAAA TCGCTACTCG CTATGGAACG AGCGCAGGGA CCTCTATCGC GATCCGCGGG CGTCGCGGGT CGGCGACCTG CTGACCGTCA CCATCTCGAT GAACGACAAG GCGACGCTCG ACAACAAGAC CGATCGGTCG CGGGATTCCG AAACCAAATT CAAAACCAAT TATCTCGCCG AGTTTCTGCC CTGGTCGAGC AAGGGTAAGC TGGAAGCCAA TGTCGATTCG CAAACCTCGA CCAAAGGCAC GGGCAAGATC GATCGCACCG AAGAGGTCAA GTTCTCGGTT GCCGCGGCGG TGGTCGACGT GCTGCCGAAC GGCAATCTGC TGATCGCGGG CTCGCAGGAA GTGCGGGTGA ACTACGAGAT GCGCGTCCTG CACGTCGGCG GCATCGTCCG GCCGCTCGAC ATCACCCGCA ACAACACCAT CGCCTACGAG AAAGTGGCGG AGGCGCGAAT TTCCTATGGC GGCCGCGGGC GCCTGATGGA GGTGCAGCAG CCGGCGTGGG GTCACCAGGT CTACGATCAG GTGGTGCCGT TCTAG
|
Protein sequence | MTLMRLPVAV TACLALAGCA NNLAELGQAP AMSPIGQGLY ADARAIPVEP RSRYAQNRYS LWNERRDLYR DPRASRVGDL LTVTISMNDK ATLDNKTDRS RDSETKFKTN YLAEFLPWSS KGKLEANVDS QTSTKGTGKI DRTEEVKFSV AAAVVDVLPN GNLLIAGSQE VRVNYEMRVL HVGGIVRPLD ITRNNTIAYE KVAEARISYG GRGRLMEVQQ PAWGHQVYDQ VVPF
|
| |