Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1100 |
Symbol | |
ID | 3969573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1203021 |
End bp | 1203746 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637924211 |
Product | hypothetical protein |
Protein accession | YP_530983 |
Protein GI | 90422613 |
COG category | [S] Function unknown |
COG ID | [COG3334] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.370505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.545096 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGCT TTGCGAGATG GCGCGGAATT GCACTGGGCT TGGGATGCTT CGCGCTCTGC GCTCAAGCGC CGGCCTTGGC GCAATCCGAG CCCAAGTTGT CGAAGCCGCT GAACCTCAGC GAATTCGCCA AAGCGTCGGC CAAAGCGTCG GCCGCCAAAT CATCGTCGGC CAAGCCGCCG TCGGCCGCGC GTTCCCGCGT GGCTGCCAAG CCCGATACGG CGCCAGATCG CGCAGCCGCG CCAGTGCAGA CCAGCGCCGG CGTCGTCAAG ACCGCGGCGG CGGCACCCGC CGCCGGCGAA GCCCCGCCGG CTCCGCCGCA AGAGTCCGAC GCCGCAAAAT TCTGCAGCAA CATCGCCGAT GCGGCGCTGG ATGCCCGCGT CGCCTGGCAG CAGAAGGAAT TGCAGGCGGC CGAGGAAAAA CTGCGCCAGC GCATCGCCGA ACTCGAAGCC AAGCGCGCCG AATACGAACA GTGGCTGAAG CTGCGCGAAG ACTTTCTGAA GAAGGCGGAA GACAGCGTGG TCGAAATCTA TTCGCGCATG GAGCCGGAAG CCGCCGCGCT GCAGATCGCC AGCATGGCCG ACGACACCGC CGCGGCGGTG CTCGCCAAAC TTCGGGTCCG CAACGCCAGC GCGATCCTCA ACGAAATGGA GCCGGGGCGT GGCGCCCGTC TCGCCGATAC GTTGGCCGGC ATGCGTCGCG CCGACGATGG GAAGACCAAG AAATGA
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Protein sequence | MASFARWRGI ALGLGCFALC AQAPALAQSE PKLSKPLNLS EFAKASAKAS AAKSSSAKPP SAARSRVAAK PDTAPDRAAA PVQTSAGVVK TAAAAPAAGE APPAPPQESD AAKFCSNIAD AALDARVAWQ QKELQAAEEK LRQRIAELEA KRAEYEQWLK LREDFLKKAE DSVVEIYSRM EPEAAALQIA SMADDTAAAV LAKLRVRNAS AILNEMEPGR GARLADTLAG MRRADDGKTK K
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