Gene RPC_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1092 
Symbol 
ID3969565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1197109 
End bp1198143 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content62% 
IMG OID637924203 
Productflagellar motor switch protein FliG 
Protein accessionYP_530975 
Protein GI90422605 
COG category[N] Cell motility 
COG ID[COG1536] Flagellar motor switch protein 
TIGRFAM ID[TIGR00207] flagellar motor switch protein FliG 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.606344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCA ATGCGCCCGC CAAGGGCAGT CCGGATCTGA AGCCGCTGCG CGGCACCGAG 
AAGGTCGCGG TGCTGCTGTT GGCGATGGGC CGCGAGCTTT CCGGCGGCAT CCTGAAGGAG
TTCGACCCCG AAGAGATCAA GATCGTCACC CGCGCCGCCG CGGACCTGAA GCCGATCTCG
ACGCCCGAGC TCGAAACCAT CATCGAGGAA TTCGCCCAGC ACTTTTCGAC GGGACCGAAC
ATTTTCGGCA CGGTGGGCGA GCTCGAGAAA TTGCTGAACG GCGTTCTGCC GCCGGACGAG
GTCTCCGACA TCATATCGGA GGTGCTGGGC AACAAGACGA AATCGGTGTG GGAGCGGATT
TCGTTCGTCT CGGAAAGCCT GCTCGCCAAC TATCTGCTCA AGGAGCATCC GCAGACCGCT
GCCTTGGTGC TGTCGCGGGT CAAGCCGGCC TGCGCCGCGC GGGTGATGAG CCACCTGCCT
TCGGATATGC GCCACGACCT GATGCGCCGC ATGCTAAGTC TCAAGCCGGT GGTCGAAGAA
GCGATGGCCA TCATCGAAAA GACCATGCAT GAAGATTTCA TGATCAATTT CGCGCGCAAC
CTGGCGTCCG ACACTTACCC GCGGATGGCC GACATCATCA ACAAGATGGA ACGCACGCAG
ATGGAAGAGT CGTTGCAGAG CCTCGCCGAA TCCCGACCGA AGTCGGCGGA AATCCTCAAG
GGGATGCTGT TCACCTTCGA CGACATCGTC AATCTGACCG GCAAGGCGCG GATGCTGATC
TTCGATCAGG TGCCGACCGA CCGGGTGGTG ACGGCGCTGA AGGGCACCGA CGCGGCGTTC
CGCGAACTCA TTCTGTCGTC GCTGGCGTCG CGGACCCGCC GCCTGGTCGA GCACGAACTG
GCCACCGGCG TGCCGGCGCA TCAACGCGAA ATCCTCGATG CGCGTCGGAC CATCACCGAC
CTTGCGCTTG AGATGGCCGG CCGAGGCGAG ATCGAACTCA ACGCGGATGA GGCCGATCAG
CCGGTTTTCA CCTAA
 
Protein sequence
MAFNAPAKGS PDLKPLRGTE KVAVLLLAMG RELSGGILKE FDPEEIKIVT RAAADLKPIS 
TPELETIIEE FAQHFSTGPN IFGTVGELEK LLNGVLPPDE VSDIISEVLG NKTKSVWERI
SFVSESLLAN YLLKEHPQTA ALVLSRVKPA CAARVMSHLP SDMRHDLMRR MLSLKPVVEE
AMAIIEKTMH EDFMINFARN LASDTYPRMA DIINKMERTQ MEESLQSLAE SRPKSAEILK
GMLFTFDDIV NLTGKARMLI FDQVPTDRVV TALKGTDAAF RELILSSLAS RTRRLVEHEL
ATGVPAHQRE ILDARRTITD LALEMAGRGE IELNADEADQ PVFT