Gene RPC_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1089 
Symbol 
ID3969562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1195394 
End bp1196329 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content63% 
IMG OID637924200 
Productflagellar motor switch protein FliM 
Protein accessionYP_530972 
Protein GI90422602 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGAGA TCAAATCGGG GCAGTCGGAG CAGGCTTCCG ATCAGCTGCT CGGAGCCGCC 
GGGATTTCGG TCGAGCGCAT GCCGATGCTG CATGTGATCT TCGACCAGAT GACCAATCTT
TGCGCGGAAG CGCTGCGGTC GATGTCGCCC TCGCAGTCGT ATTTCTCGCT GAGCGGCGTC
GGCAGCGACC GGCTTTCCGA CATCGTCGAT CGCTACGAGG GAGAGGCCAT CGCCGCGGTG
TTCTATGCCC AGGCGTGGGA TGCCCGGGTG CTGATCGGCT TCGATCGCGA TTTCATCTAC
ACCATGATCG AGTTGCTGTT CGGCGCCGAC GGCGCCGAGC CGCCGCTGGA CATGCCGCGG
GTGTTCTCTA ATGTGGAGAT GCACGTCGCG CAGGCGCTGT TCGAGCGCTT CGGCAAGGCG
CTGCAGTCGT CGTTCTCGCG GGCCTCCGAC GTCAACTTCA CCCTGGAGCG CGTCGAGACC
CGGATGGACT ATCTGGCGGT CGGCCGGCTC AACAACATGG CGGTGTGCGC CAACATCCTG
CTGCAGGGGC TGGACCGCGG CGGCGAGATG TTCATCGTGA TTCCGCACGC CGCGCTCAAT
CCGATCCGCC AGGCGCTGTC GCAGATCGTG ACCGGCGAGT CGGCGTCGAC CGACCCGAAC
TGGAGCCGGC AGTTGCACAG CGAGATCAAG CGCACCGAGG TGGTGCTGAA AGCGGTGCTC
GAAGAACGGC CGTTCACCCT CGGAGAGGTC GCCGGCTTTC ACGTCGGCCA GGTGATCAAG
CTCAATGCCA CGCCGAATAC GATGGTGCGG CTTGAGTGCA ACAATCAGCG GCTGTTCTGG
TGCCAGCTTG GGCAGCTGAA CGGTGTCTAT TCGCTGCAGG TCAAGGAATC TGCGGATCAA
AAGCGGGAAT TCATCGATGG CATCCTATCT CGTTGA
 
Protein sequence
MVEIKSGQSE QASDQLLGAA GISVERMPML HVIFDQMTNL CAEALRSMSP SQSYFSLSGV 
GSDRLSDIVD RYEGEAIAAV FYAQAWDARV LIGFDRDFIY TMIELLFGAD GAEPPLDMPR
VFSNVEMHVA QALFERFGKA LQSSFSRASD VNFTLERVET RMDYLAVGRL NNMAVCANIL
LQGLDRGGEM FIVIPHAALN PIRQALSQIV TGESASTDPN WSRQLHSEIK RTEVVLKAVL
EERPFTLGEV AGFHVGQVIK LNATPNTMVR LECNNQRLFW CQLGQLNGVY SLQVKESADQ
KREFIDGILS R