Gene RPC_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1088 
Symbol 
ID3969561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1194549 
End bp1195394 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content63% 
IMG OID637924199 
Productflagellar motor protein MotA 
Protein accessionYP_530971 
Protein GI90422601 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGGC ACATCGGCGT CATCTGGCAA CCCTGGGAGT TCGTCATCAT CGGCGGCATG 
GCGCTCGGGA CCTATATCGT AGCCAATCCC TGGAAGGTGG TGGTCGACAC CGGCGTCGCC
GTGGTGCAGG CGCTGACCAT GGCGGTGCCG CAGCAGCGCC ATTATCTCGA TCTGCTCGGG
CTGTTGCATT CGCTGATGCG CGAGGTGCGC AACAAGGGCC GCAACGAAGT CGAAGGGCAC
ATCGACGATC CCGCTTCGTC GGAGATCTTC GGCAATTTTC CGACCGTGTT GGCCAACGAG
GCGATGGTGA GCTTCATCTG CGACTATTTC CGGCTGATCA TCATGGGCAG CGCCCGGCCT
CACGAGATCG AAGCGCTGAT GGACGAAGAG ATCGAAACCA TCGTCCGCAG CAAATTGAAG
CCGTACAGTT CGATGATGAT GGTCGCCGAG GGACTGCCGG CGCTCGGGAT CGTGGCGGCG
GTGCTCGGCG TGATCAAGGC GATGGGCGCG CTCGATCAGT CGCCGAAGTT GCTCGGCGGC
TTCATCGGCT CGGCGTTGGT CGGAACCTTC GCCGGCATCT TTCTGTCCTA CGGCCTGGTG
GCGCCGTTGG CCGCCAAGGT CAAATCGGTG CGCGAGCGGC AATGCCGGAT GTACATCATC
GTCAAACAGA CGCTGCTGGC ATTCATGAAC GGCGCGCTGC CGCAGATCGC CATCGAACAT
GGCCGCAAGA TGATCGGGCC CGGCGAACGG CCGTCGATCG ACGTGGTGGA AAACGAGACG
ATCTCCGGCG GGGCGGCGAA GGCTGCAACC CCGGACCAAG CCGCGAGAGC GGGAGCGGGG
GCGTAG
 
Protein sequence
MGGHIGVIWQ PWEFVIIGGM ALGTYIVANP WKVVVDTGVA VVQALTMAVP QQRHYLDLLG 
LLHSLMREVR NKGRNEVEGH IDDPASSEIF GNFPTVLANE AMVSFICDYF RLIIMGSARP
HEIEALMDEE IETIVRSKLK PYSSMMMVAE GLPALGIVAA VLGVIKAMGA LDQSPKLLGG
FIGSALVGTF AGIFLSYGLV APLAAKVKSV RERQCRMYII VKQTLLAFMN GALPQIAIEH
GRKMIGPGER PSIDVVENET ISGGAAKAAT PDQAARAGAG A