| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1071 |
|---|
| Symbol | |
|---|
| ID | 3969583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 1173135 |
|---|
| End bp | 1173959 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637924182 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_530954 |
|---|
| Protein GI | 90422584 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGGGCCG GACAACCTTT CGCTGCAGGG AGCAGGGATT TGCGAACGCG CTGGGCCATC
GTCGCGAATT TGTTGACGCA ACGGATCGTC GGCGGCGAAT ATCCGGTTGG CACGGTGATG
CCGAACGAAG TCGACTTGGC AGAACAACTC GGGGTCAGCC GCTCGACGGT GCGCGCCGCG
CTTGGCGAAT TGCAGCAGGC CGGGATGATT TCGCGGCGGC GCAACGCCGG CACCCGCGTC
GAATCCGTGC GGCCGCTGCG CGGTCCCGGA AGTTACAACC AGACCCTGGC GACGATCGAA
GATGTTGCGC AATACGGCGC GCAAACCGAC CGGCATGTGC AGGAGATCGC AACCGAGATC
GCCGATAGCA AGCTCGCGAC GTTGCTGGAC TGTGCACCGG GCGAAGCGTG GCTGCGGGTG
TCGAGCCTGC GCTCCTCGCC GATCGCATCA TCGCCGCCGC TGTGCTGGAC CGACGTCTAC
GTCGCGCCGA TGTTCGCGGC GATCGTGCGT CAGCGCGTCG CCGATTATCC CGGGCTGATC
AGCACGCTGA TCGAGGACTT CGCCGGCCAC CCCACCGCCG AAATTCACCA GACCATCACC
GCCATCGGCG TACCGAAGCG GCTGGTCACG GCGCTGGAGG CGAAGCAGGG TGCCCATGCG
CTGGAAATTA CCCGTCGCTA TCTCGACGCC AAGGACCGGG TCTTCATCGT CAGCCGGAGC
ATTCATCCGG CCGACCGATT CTCCTACGAC AGCCGCCTGA AGCGACAATC GGCACCGAGC
GGCGTCTATC CGCTGAGCGC CAAACCAAAG CGGCTGGCGG GCTGA
|
|---|
| Protein sequence | MWAGQPFAAG SRDLRTRWAI VANLLTQRIV GGEYPVGTVM PNEVDLAEQL GVSRSTVRAA
LGELQQAGMI SRRRNAGTRV ESVRPLRGPG SYNQTLATIE DVAQYGAQTD RHVQEIATEI
ADSKLATLLD CAPGEAWLRV SSLRSSPIAS SPPLCWTDVY VAPMFAAIVR QRVADYPGLI
STLIEDFAGH PTAEIHQTIT AIGVPKRLVT ALEAKQGAHA LEITRRYLDA KDRVFIVSRS
IHPADRFSYD SRLKRQSAPS GVYPLSAKPK RLAG
|
|---|
| |