| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1025 |
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| Symbol | |
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| ID | 3969674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1123829 |
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| End bp | 1125403 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637924137 |
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| Product | benzoate-CoA ligase family |
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| Protein accession | YP_530909 |
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| Protein GI | 90422539 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02262] benzoate-CoA ligase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCTG CAGGGGTCGC TGCGCCGCCG GAGAGATTCA ATATCGCCGG GCATCTGCTG
CAGGCTAATT GCGGCCGGCC GGACAAGCTG GCCTTCATCG ACGACTCAAG CGCGCTCAGC
TTCGCCCAGC TCGACGAAAA AGCGAGGCGG TCGGCGGCAG GCCTGCGCGC CCTCGGCATC
AAGCGCGAAG AACGCGTCTT CCTGCTGATG CTTGATGGCA CCGACTGGCC GATTGCATTC
CTCGGCGCGA TCTACGCCGG CATCGTCCCG GTCGCGGTCA ATACGCTACT GACCGGCGAC
GACTACGCCT ACATGCTGGA GCATTCCCGC GCGCAGGCCG TGCTGGTCAG CGGCGCGCTG
CGCGGCACGT TGAAGATGGC GCTGACCAAG AGCGATCACG AGGTGCACAA GGTGATTGTG
TCTCACCCTG ACGCGCCGCT CGAACCCAAC GAGGTCGAAT TCGAGGCCTT CGTCGGCGCG
CACGCACCAC TGCAGAAGCC CGCCGCCACC CATGCCGACG ATCCGGCATT CTGGCTGTAT
TCCTCCGGCT CAACCGGGCG CCCGAAGGGG GTCGTCCACA CCCAGGCGAA CCCGTACTGG
ACTGCGGAAC TCTACGCCCG CAACACGCTG CAGCTGCAGG AGAGCGACGT CTGTTTCTCG
GCTGCGAAAC TGTTCTTCGC CTACGGCCTC GGCAACGCGC TGACCTTTCC GCTGAGCGTG
GGTGCTACGA CGCTACTGAT GCCCGAGCGC CCGACGCCGG ACGCGGTGTT CAAGCGCTGG
CTCGGCGGTG TCGCCGGCTT GAAACCGACG GTCTTCTTCG GCGCACCAAC CGGCTATGCG
GGCATTTTAG CCGCGTCCAA CCTGCCAGCG CGTGAGCAGA TTACACTGCG GATGGCCTCC
TCCGCGGGCG AAGCGCTGCC GGCGGAGATC GGCCAGCGCT TCCAGCGCCA TTTCGGCATC
GACATCGTCG ATGGTATCGG TTCGACCGAG ATGCTGCACA TCTATCTGTC GAATCTGCCC
GATCGGGTTT GCTACGGCAC CACCGGCTGG CCGGTGCCGG GCTACGAAAT CGAATTGCGC
GGCGACGCTG GTGGGCCGGT GCCGGACGGC GAACCGGGCG ACCTCTACAT TCATGGCCCC
TCGTCGGCGA CGATGTATTG GGGCAACCGC GCGAAAACCC AGGAGACTTT TCAGGGCGGC
TGGACCAAGT CCGGCGACAA ATACATCCGC AATGAGGACG GCTCCTACTC CTATGCCGGG
CGCACCGACG ACATGCTCAA GGTCAGCGGC ATCTATGTCA GCCCGTTCGA AATCGAGGCG
ACGTTGGTGC AGCATCCCTC GGTGCTGGAA GCCGCGGTGG TCGGCGTCGT TGACGAGAAT
GGCCTGACCA AGCCGAAGGC CTATGTGGTG CAACGGCCGG GCGTAGCCGT ATCCGAAGCC
GAATTGAAGA CCTTCATCAA GGATCGATTG GCGCCCTACA AATATCCGCG CAGCACGGTG
TTCGTCGAGG AACTTCCGAA AACCGCGACC GGAAAGATCC AGCGCTTCAA GCTTCGCGAG
GGTACCTTGG GCTGA
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| Protein sequence | MNAAGVAAPP ERFNIAGHLL QANCGRPDKL AFIDDSSALS FAQLDEKARR SAAGLRALGI
KREERVFLLM LDGTDWPIAF LGAIYAGIVP VAVNTLLTGD DYAYMLEHSR AQAVLVSGAL
RGTLKMALTK SDHEVHKVIV SHPDAPLEPN EVEFEAFVGA HAPLQKPAAT HADDPAFWLY
SSGSTGRPKG VVHTQANPYW TAELYARNTL QLQESDVCFS AAKLFFAYGL GNALTFPLSV
GATTLLMPER PTPDAVFKRW LGGVAGLKPT VFFGAPTGYA GILAASNLPA REQITLRMAS
SAGEALPAEI GQRFQRHFGI DIVDGIGSTE MLHIYLSNLP DRVCYGTTGW PVPGYEIELR
GDAGGPVPDG EPGDLYIHGP SSATMYWGNR AKTQETFQGG WTKSGDKYIR NEDGSYSYAG
RTDDMLKVSG IYVSPFEIEA TLVQHPSVLE AAVVGVVDEN GLTKPKAYVV QRPGVAVSEA
ELKTFIKDRL APYKYPRSTV FVEELPKTAT GKIQRFKLRE GTLG
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