Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1023 |
Symbol | |
ID | 3969672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1123094 |
End bp | 1123558 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637924135 |
Product | BadM/Rrf2 family transcriptional regulator |
Protein accession | YP_530907 |
Protein GI | 90422537 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTAC AGAAATCGAC GATGTGTGGA TTGTATGCCG TGCTCGAACT CGCGGCGCAC GCCGATCAGC AGATTTCCGC TGGCGATATC GCCGAAAAAT ACGCCATCTC ACTCAATCAT TTGGCCAAGG TACTGCGCGC CTTGGTGCGA GCCCGCCTGA TCGAATCGGT GCGCGGTCCT GGTGGCGGCT ATCGCTTCAG CGGCAATCCG AAGCGTGTCA CCCTGCTCGA TATTATCACG CTGTTCGAAG ATACCGCGCC TGATCTCGAA CAGGCAGCTT CAGACGATCA CGAAGAAAGT CGGGCGCTGC ACAAGATGCT GCGAGACATC GACGGAATTG CGATGACGAC GTTACGATCG ATCTCGATCA CGTCGCTCCT GAAGGTGATC GAGACCGAGC GACGCAAGAG CGAGCGCACC TCGCACGGTC AATCTGTTCG GCTGTCCTCG GCCGGTAGGG CTTAG
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Protein sequence | MKLQKSTMCG LYAVLELAAH ADQQISAGDI AEKYAISLNH LAKVLRALVR ARLIESVRGP GGGYRFSGNP KRVTLLDIIT LFEDTAPDLE QAASDDHEES RALHKMLRDI DGIAMTTLRS ISITSLLKVI ETERRKSERT SHGQSVRLSS AGRA
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