Gene RPC_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1023 
Symbol 
ID3969672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1123094 
End bp1123558 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content58% 
IMG OID637924135 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_530907 
Protein GI90422537 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTAC AGAAATCGAC GATGTGTGGA TTGTATGCCG TGCTCGAACT CGCGGCGCAC 
GCCGATCAGC AGATTTCCGC TGGCGATATC GCCGAAAAAT ACGCCATCTC ACTCAATCAT
TTGGCCAAGG TACTGCGCGC CTTGGTGCGA GCCCGCCTGA TCGAATCGGT GCGCGGTCCT
GGTGGCGGCT ATCGCTTCAG CGGCAATCCG AAGCGTGTCA CCCTGCTCGA TATTATCACG
CTGTTCGAAG ATACCGCGCC TGATCTCGAA CAGGCAGCTT CAGACGATCA CGAAGAAAGT
CGGGCGCTGC ACAAGATGCT GCGAGACATC GACGGAATTG CGATGACGAC GTTACGATCG
ATCTCGATCA CGTCGCTCCT GAAGGTGATC GAGACCGAGC GACGCAAGAG CGAGCGCACC
TCGCACGGTC AATCTGTTCG GCTGTCCTCG GCCGGTAGGG CTTAG
 
Protein sequence
MKLQKSTMCG LYAVLELAAH ADQQISAGDI AEKYAISLNH LAKVLRALVR ARLIESVRGP 
GGGYRFSGNP KRVTLLDIIT LFEDTAPDLE QAASDDHEES RALHKMLRDI DGIAMTTLRS
ISITSLLKVI ETERRKSERT SHGQSVRLSS AGRA