Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1020 |
Symbol | |
ID | 3969669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1121372 |
End bp | 1122094 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637924133 |
Product | ABC transporter related |
Protein accession | YP_530905 |
Protein GI | 90422535 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCA TAGCGGAAGT GATGCTCAAG GCGCGCGGCA TCGATACGTT TTACGGGCCC AGCCATATCT TGCGCGGCGT CAACTTTCAT GTCGATCGGG GCGAAACCGT CAGCCTGCTG GGGCGAAACG GCATGGGCAA GACCACGCTG CTGCGCACGC TGATGGGATT GCTGAAGCCG AAACGTGGGT CAATCCTACT GAACGGACGC GATATGACCG ACGCCCGCCC GAATATCAAG GCGCGGGCCG GTATGGGCTT TGTCCCGGAG GGACGGGGGA TTTTCCCCAA CCTTTCGGTC GAGGAGAATT TGCTGTTCGC CGAACGCCCT GGCCCCGAAG GGCAGGTCGA GTGGACGCCC GAGGCGATCT ACGAGATGTT TCCAAGGCTC GCCGATCGTC GCAAGATTTG GGGCAATCTG CTGTCTGGTG GAGAGCAGCA GATGCTTACG ATCGGACGCG TTCTGCTGAG CAATCCGACC CTCCTGCTGA TCGACGAAGC GACCGAGGGC CTCGCGCCGA AAATGCGCGA CGAGATATGG AAGACGATGA GATTGATCGC AACGAAAGGG ATTGCGATTG TGATCGTCGA TAAGAACCTC GACGACCTGG TCGAATTGGT CGATCGGCAC GTCATCCTAA CCAAGGGCGA GGTCGTGTTC GAGGGAACGT CGGAGCAGTT GCTCGCGGAT CAGGAAATGG TCAAGACCAT GCTGGGAGTA TGA
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Protein sequence | MTAIAEVMLK ARGIDTFYGP SHILRGVNFH VDRGETVSLL GRNGMGKTTL LRTLMGLLKP KRGSILLNGR DMTDARPNIK ARAGMGFVPE GRGIFPNLSV EENLLFAERP GPEGQVEWTP EAIYEMFPRL ADRRKIWGNL LSGGEQQMLT IGRVLLSNPT LLLIDEATEG LAPKMRDEIW KTMRLIATKG IAIVIVDKNL DDLVELVDRH VILTKGEVVF EGTSEQLLAD QEMVKTMLGV
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