Gene RPC_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1020 
Symbol 
ID3969669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1121372 
End bp1122094 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content59% 
IMG OID637924133 
ProductABC transporter related 
Protein accessionYP_530905 
Protein GI90422535 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA TAGCGGAAGT GATGCTCAAG GCGCGCGGCA TCGATACGTT TTACGGGCCC 
AGCCATATCT TGCGCGGCGT CAACTTTCAT GTCGATCGGG GCGAAACCGT CAGCCTGCTG
GGGCGAAACG GCATGGGCAA GACCACGCTG CTGCGCACGC TGATGGGATT GCTGAAGCCG
AAACGTGGGT CAATCCTACT GAACGGACGC GATATGACCG ACGCCCGCCC GAATATCAAG
GCGCGGGCCG GTATGGGCTT TGTCCCGGAG GGACGGGGGA TTTTCCCCAA CCTTTCGGTC
GAGGAGAATT TGCTGTTCGC CGAACGCCCT GGCCCCGAAG GGCAGGTCGA GTGGACGCCC
GAGGCGATCT ACGAGATGTT TCCAAGGCTC GCCGATCGTC GCAAGATTTG GGGCAATCTG
CTGTCTGGTG GAGAGCAGCA GATGCTTACG ATCGGACGCG TTCTGCTGAG CAATCCGACC
CTCCTGCTGA TCGACGAAGC GACCGAGGGC CTCGCGCCGA AAATGCGCGA CGAGATATGG
AAGACGATGA GATTGATCGC AACGAAAGGG ATTGCGATTG TGATCGTCGA TAAGAACCTC
GACGACCTGG TCGAATTGGT CGATCGGCAC GTCATCCTAA CCAAGGGCGA GGTCGTGTTC
GAGGGAACGT CGGAGCAGTT GCTCGCGGAT CAGGAAATGG TCAAGACCAT GCTGGGAGTA
TGA
 
Protein sequence
MTAIAEVMLK ARGIDTFYGP SHILRGVNFH VDRGETVSLL GRNGMGKTTL LRTLMGLLKP 
KRGSILLNGR DMTDARPNIK ARAGMGFVPE GRGIFPNLSV EENLLFAERP GPEGQVEWTP
EAIYEMFPRL ADRRKIWGNL LSGGEQQMLT IGRVLLSNPT LLLIDEATEG LAPKMRDEIW
KTMRLIATKG IAIVIVDKNL DDLVELVDRH VILTKGEVVF EGTSEQLLAD QEMVKTMLGV