Gene RPC_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1003 
Symbol 
ID3969690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1102541 
End bp1103068 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content57% 
IMG OID637924120 
Producthypothetical protein 
Protein accessionYP_530892 
Protein GI90422522 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00979437 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTAATGC CGCTTCCGGT CCCTGCCGCT TGTTCCCTGC AATTGGTCGA TGATCTGGTG 
GCCGAACGCC AGTCCGGGAA GAACAAGTTG TTCTTCAACG GGATCGCTGC CGAGTGGCGT
CGGCGCGTTC AAACGTACTT GGACGAGCGC GGCTCGCCAG CAACAGTCCC GACCTGGCCT
TTGATCGGAC CAGACAAGAA GAAGTTTCTG AACCTCTACG CCTCCCCGGC CGACGGTACC
GCCCAGAAGA ATGTGCTGGC CGCGCTACGC GATCATACTC TGACAATATG TCCCGCTTGC
GGAGAGGCGG GCAGGCCGAA TACATTGGAC CACTATCTTC CGAAGGATGT ATATCCGCAC
TTCTGCGTCA CGCCGCACAA TCTGTTTCCG ATGTGCGACG CTTGCCAAAT AGAAAAGGGT
AGCAAGACCG GAGACGTCGC CGATCCGCGC TTCTTTCTGC ACCCATACTA CGACATTTTT
ATAGGCCAGC AGGTACTTGG GCTTTCGATC CACGCGCCCT ATGTGTGA
 
Protein sequence
MVMPLPVPAA CSLQLVDDLV AERQSGKNKL FFNGIAAEWR RRVQTYLDER GSPATVPTWP 
LIGPDKKKFL NLYASPADGT AQKNVLAALR DHTLTICPAC GEAGRPNTLD HYLPKDVYPH
FCVTPHNLFP MCDACQIEKG SKTGDVADPR FFLHPYYDIF IGQQVLGLSI HAPYV