Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1003 |
Symbol | |
ID | 3969690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1102541 |
End bp | 1103068 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637924120 |
Product | hypothetical protein |
Protein accession | YP_530892 |
Protein GI | 90422522 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00979437 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTAATGC CGCTTCCGGT CCCTGCCGCT TGTTCCCTGC AATTGGTCGA TGATCTGGTG GCCGAACGCC AGTCCGGGAA GAACAAGTTG TTCTTCAACG GGATCGCTGC CGAGTGGCGT CGGCGCGTTC AAACGTACTT GGACGAGCGC GGCTCGCCAG CAACAGTCCC GACCTGGCCT TTGATCGGAC CAGACAAGAA GAAGTTTCTG AACCTCTACG CCTCCCCGGC CGACGGTACC GCCCAGAAGA ATGTGCTGGC CGCGCTACGC GATCATACTC TGACAATATG TCCCGCTTGC GGAGAGGCGG GCAGGCCGAA TACATTGGAC CACTATCTTC CGAAGGATGT ATATCCGCAC TTCTGCGTCA CGCCGCACAA TCTGTTTCCG ATGTGCGACG CTTGCCAAAT AGAAAAGGGT AGCAAGACCG GAGACGTCGC CGATCCGCGC TTCTTTCTGC ACCCATACTA CGACATTTTT ATAGGCCAGC AGGTACTTGG GCTTTCGATC CACGCGCCCT ATGTGTGA
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Protein sequence | MVMPLPVPAA CSLQLVDDLV AERQSGKNKL FFNGIAAEWR RRVQTYLDER GSPATVPTWP LIGPDKKKFL NLYASPADGT AQKNVLAALR DHTLTICPAC GEAGRPNTLD HYLPKDVYPH FCVTPHNLFP MCDACQIEKG SKTGDVADPR FFLHPYYDIF IGQQVLGLSI HAPYV
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