Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0958 |
Symbol | |
ID | 3969721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1052743 |
End bp | 1053264 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637924074 |
Product | double-stranded beta helix domain-containing protein |
Protein accession | YP_530847 |
Protein GI | 90422477 |
COG category | [S] Function unknown |
COG ID | [COG4297] Uncharacterized protein containing double-stranded beta helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.328087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.108892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA CGCGCGACCA TATCAAACCG TTGACTTACC TGTTCGAAGA CGACGGGCTG GTGCCGAACA ACGCGCTGCC GCTGGTGGTT TACAAGCGCG CGATCGAGGT GCCGCGGACC GATCCCGCGC GGAGCATCGA AGAGCTGTTC GGGCGCAACG GCTGGGGGCA GCTGTGGCGC GACGGCGTCT TCGATTTCCA GCACTACCAT GCCACGGTGC ACGAGGCGCT CGGCGTGGCC CGCGGCCATG CACTGGTGCT GTTCGGCGGC GAACGCGGCG AAGCCGTGCA ACTCGGCATC GGCGACGTCG CGATATTGCC CGCCGGCACC GGTCACAAAA GCCTGTTCGC CAGCCACGAT TTTCAGGTGG TCGGCGCCTA TCCGCCGGGC GATACGATGC AGGTGACGCG GCCGACGCCG GACAGCTACC GCAGAGCCCT GCAGACGATC CCGCAAGTGC CGGTCCCCGC GAGCGATCCG GTGTTCGGCG AGGCCGGACC GCTGACCCGG CTGTGGCGCT GA
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Protein sequence | MTDTRDHIKP LTYLFEDDGL VPNNALPLVV YKRAIEVPRT DPARSIEELF GRNGWGQLWR DGVFDFQHYH ATVHEALGVA RGHALVLFGG ERGEAVQLGI GDVAILPAGT GHKSLFASHD FQVVGAYPPG DTMQVTRPTP DSYRRALQTI PQVPVPASDP VFGEAGPLTR LWR
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