Gene RPC_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0958 
Symbol 
ID3969721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1052743 
End bp1053264 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content68% 
IMG OID637924074 
Productdouble-stranded beta helix domain-containing protein 
Protein accessionYP_530847 
Protein GI90422477 
COG category[S] Function unknown 
COG ID[COG4297] Uncharacterized protein containing double-stranded beta helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.328087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.108892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CGCGCGACCA TATCAAACCG TTGACTTACC TGTTCGAAGA CGACGGGCTG 
GTGCCGAACA ACGCGCTGCC GCTGGTGGTT TACAAGCGCG CGATCGAGGT GCCGCGGACC
GATCCCGCGC GGAGCATCGA AGAGCTGTTC GGGCGCAACG GCTGGGGGCA GCTGTGGCGC
GACGGCGTCT TCGATTTCCA GCACTACCAT GCCACGGTGC ACGAGGCGCT CGGCGTGGCC
CGCGGCCATG CACTGGTGCT GTTCGGCGGC GAACGCGGCG AAGCCGTGCA ACTCGGCATC
GGCGACGTCG CGATATTGCC CGCCGGCACC GGTCACAAAA GCCTGTTCGC CAGCCACGAT
TTTCAGGTGG TCGGCGCCTA TCCGCCGGGC GATACGATGC AGGTGACGCG GCCGACGCCG
GACAGCTACC GCAGAGCCCT GCAGACGATC CCGCAAGTGC CGGTCCCCGC GAGCGATCCG
GTGTTCGGCG AGGCCGGACC GCTGACCCGG CTGTGGCGCT GA
 
Protein sequence
MTDTRDHIKP LTYLFEDDGL VPNNALPLVV YKRAIEVPRT DPARSIEELF GRNGWGQLWR 
DGVFDFQHYH ATVHEALGVA RGHALVLFGG ERGEAVQLGI GDVAILPAGT GHKSLFASHD
FQVVGAYPPG DTMQVTRPTP DSYRRALQTI PQVPVPASDP VFGEAGPLTR LWR