Gene RPC_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0956 
Symbol 
ID3969719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1051166 
End bp1051861 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID637924072 
Productmethyltransferase type 12 
Protein accessionYP_530845 
Protein GI90422475 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.185051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACT GGATCGACTA TTACGACTCC ACGCACACGA TCTATGTCAG CAAGCTGCAC 
CGCGACGTGC ATTTCCGGCA GATCGCCGAG GACATCGTGG GCTATATCCC TTCGGCCGAG
GCCACCGTGC TGGATTACGC CTGCGGCGAG GCGCTGTCGG CCGGCCGGGT CGCCGAGGCC
TGCGCCCGGC TGATCCTGGC GGAGCCGGCG CCCGGCGTGC GCGGCCGGCT GATCGCCCGC
TTCGCGCCCA ACATCAAGAT CCGGGTGCGC TCGCTCGACG AGTTGCGCAA CATGGAGGAG
AACTCCGTCG ACCTCGCGGT GATGAATTCG GTCGCGCAAT ATATGACCGC GCAGGAACTC
GACACCGCGC TGATGGTGGT CGGCCGGCTC TTGAAGCCCG GCGGGCAGCT GGTGGTCGGC
GATATCTTGC GGCCCGACGT CGGCATGGCG CAGGACGTCG CCGCGCTGTT GCGCTTCGCG
CTGGCGCACG GCTTCGTCAA GGACGCGCTG TGGGGACTGG CGCGCACCGC GCTGTCGGAC
TATCGCGAAT TGCGCAGCAA GATCGGGCTG CAGCGCTACG CCGAGGCCGA GATGATCGGC
AAGCTCACCG CCGCCGGCTT CACCGCGGCC CGCGCGCCGA ACAATATCGG GCACAATCCG
TCGCGGATGA CGTTTGTGGC GACGAAGAAG GATTAG
 
Protein sequence
MDDWIDYYDS THTIYVSKLH RDVHFRQIAE DIVGYIPSAE ATVLDYACGE ALSAGRVAEA 
CARLILAEPA PGVRGRLIAR FAPNIKIRVR SLDELRNMEE NSVDLAVMNS VAQYMTAQEL
DTALMVVGRL LKPGGQLVVG DILRPDVGMA QDVAALLRFA LAHGFVKDAL WGLARTALSD
YRELRSKIGL QRYAEAEMIG KLTAAGFTAA RAPNNIGHNP SRMTFVATKK D