Gene RPC_0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0915 
Symbol 
ID3969756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1014070 
End bp1015008 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content68% 
IMG OID637924031 
Producthypothetical protein 
Protein accessionYP_530804 
Protein GI90422434 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.268023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAG CTGCCGAGCG CGATCCACCG GAAGTCCTCG CCCTGCGACG CGCCGACGGC 
GAAAGCCGGA GTCTCGCCGC GTCGTTGCCG CGGCTGATGC TGGAAGCCCG CCGGATCGCC
GCCAATGTGA TCCACGGCGT GCATGGCCGG CGCCGTGCCG GCGCCGGCGA GAGCTTTTGG
CAATATCGAC GCTTCGTTTC CGGCGAGCCG TCGCAGAATG TCGACTGGCG CCGCTCGGCG
CGCGACGACC ATTTGTACGT CCGCGAACAG GAGTGGGAAG CCGCGCACAC CGTATGGCTG
TGGCCGGACC GCTCGTTGTC GATGGCATTC GCCTCCAAGA CCGCGCGCGA CTCGAAGCTC
GAACGGGCGC TGATCGTCAG TTTCGCGCTG GCGCAACTCT TGGTCGCCGG CGGCGAGCGC
GTCGGCGTGC CCGGACTGAT GAACCCGACC TCGAACAGCA ATGTGATCGA CAAGATGGCG
CAGGCGATGC TGCACGACAC CGGCACGCGC GCCAGCCTGC CGCCGTCCTT CGTGCCGGCG
GCGCTGGCCG AAATCGTCGT GCTGTCGGAT TGCTGGTCGC CGATCGCCGA GATCAAGACC
ATGCTGGCCG GGCTGTCGGC CTCCGGCGCC CATGGCACGC TGGTCCAGGT GGTCGACCCC
GCCGAAGAGA GCTTTCCGTA TTCCGGACGC GTCGAATTCG TCGACCCTGA GGGCGGCGAG
ATGATCACCG CCGGCCGCGC CGAGAAATGG GCGAGCGATT ACGTGGCCCG CGTCGCCGCG
CATCGCGACC AGATCCGCGC CGAGACCAAT AAGCTCGACT GGCTGTTCTC CACCCACACC
ACCAGCCGTT CCGCCGCCGA ACTGCTGCTG TTCCTGCACG CCGGCATGAC GGTGACCAAG
AACACCACGC CCGGCGTCAA AGTGGGACGC AGCGCATGA
 
Protein sequence
MAAAAERDPP EVLALRRADG ESRSLAASLP RLMLEARRIA ANVIHGVHGR RRAGAGESFW 
QYRRFVSGEP SQNVDWRRSA RDDHLYVREQ EWEAAHTVWL WPDRSLSMAF ASKTARDSKL
ERALIVSFAL AQLLVAGGER VGVPGLMNPT SNSNVIDKMA QAMLHDTGTR ASLPPSFVPA
ALAEIVVLSD CWSPIAEIKT MLAGLSASGA HGTLVQVVDP AEESFPYSGR VEFVDPEGGE
MITAGRAEKW ASDYVARVAA HRDQIRAETN KLDWLFSTHT TSRSAAELLL FLHAGMTVTK
NTTPGVKVGR SA