| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0896 |
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| Symbol | |
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| ID | 3969776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 993496 |
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| End bp | 994350 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637924012 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_530785 |
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| Protein GI | 90422415 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01459] HAD-superfamily class IIA hydrolase, TIGR01459
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.289944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATCT TGCGTTTTGT CGAGCATCTG AGCGAGCTGG TGGCCGACGT CGACGTCGTG
CTCAGCGATA TCTGGGGCGT CGTGCACAAC GGGCTGGAGT CCTTCCCGGA CGCCTGCGCG
GCCTTGAAGA CCGCGCGCGA CCAGGGCCGC ACGGTGATCC TGATCACCAA CGCGCCGCGC
CCGGCGGATT CGGTGCAGCG GCAGCTGCGC AAGCTCGGCG TCGCCGACGA CAACTATGAT
GCGATCGTCT CGTCCGGCGA CCTGACGCGG AATTACGTCG CCGCGCGCAA CGGCCAGTCG
GTGTTCTGGC TCGGCCCGGA GCGCGACAAC TCGATCTATC GCGGGCTCGA TGCGGTGTTC
GCGCCGCTCG ATCAGGCCGA CTACATCGTC TGCACCGGCC CGTTCGACGA CGAGACCGAA
TCCGCCGAGG ACTATCGGGT GATGATGGGA GAGGCGCTGG CGCGCAAGCT GCCGCTGGTC
TGCGCCAATC CCGACATCGT GGTGGAGCGC GGCGACCGGC TGGTGTATTG CGCCGGCGCG
ATCGCCGAAT TGTATCGCGA GCTCGGCGGC GAGGTGATCT TCTACGGCAA GCCGCACCGG
CCGATCTACC AGCGCGCTCT GGCGATCGCG CAGGCGTTAC GCGGAGCCCC GGTGCCGCTC
GACCGGGTGC TGGCGATCGG CGATTCGGTG CGCACCGATC TCGCCGGCGC GCAGCGCTTC
GGCATCGACT GCCTGTTCGT CACCCGCGGG ATTCACGCCG CGGCGTTCGA GGGTCTCGAC
GGGCTGGATG CCTTGCAGGT GCGCGAATTG TTCGGCCACC CGCCGCGGGC GCTGACTCGC
GAATTGCGCT GGTAG
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| Protein sequence | MTILRFVEHL SELVADVDVV LSDIWGVVHN GLESFPDACA ALKTARDQGR TVILITNAPR
PADSVQRQLR KLGVADDNYD AIVSSGDLTR NYVAARNGQS VFWLGPERDN SIYRGLDAVF
APLDQADYIV CTGPFDDETE SAEDYRVMMG EALARKLPLV CANPDIVVER GDRLVYCAGA
IAELYRELGG EVIFYGKPHR PIYQRALAIA QALRGAPVPL DRVLAIGDSV RTDLAGAQRF
GIDCLFVTRG IHAAAFEGLD GLDALQVREL FGHPPRALTR ELRW
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