Gene RPC_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0858 
Symbol 
ID3969816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp946488 
End bp947282 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content64% 
IMG OID637923974 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_530747 
Protein GI90422377 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.229661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTATC AGGACGTCAT TCTGTCGCGC GAGAGCGGCT GGATCGAGAT CACCATCAAC 
CGGCCGGACA AGCTGAACTC GCTGCGCGAG CAGACCGCGG AGGAAATCCT CGCGATCCTC
GGCGAGGTCG AGCACGATCG CGAGGTCCGC GCGGTGATCC TGCGCGGCAG CGACAAGGCG
TTCTGCACCG GGATCGACAC CAGCGAATTC CAGATCGCCG AGAACGGCTA TTTCGATTTC
TATCGCTTCC GCAAGCGCAA CCGCAAAGTC AACCGGCTGT TCCGTGAGAT CGGCTCGTTC
ACCAAGCCGC TGATCGCGGC GATCGAAGGC TTTGCGCTCG GCGGCGGGCT CGAACTGGCG
CTGGTCGGCG ACATCATCGT GGCCGGCGCC AACGCCAAAT TCGGCTTGCC GGAGATCAAG
CTCGGCATGA TGCCGGGCGG CGGCGGCACG CAGACGCTGC CGCGGCTGAT CGGCAAGCCG
CTCGCCAAGG AATTGATGTG GACCGGGCGG CGGATCACCG CCGCCGAAGC CGAGCGCTAT
CGCATGGTCA ATCACGTCAC CGAGGCCGGC CACGCCATCG ACAAGGCGCG CGAGATCGCG
AAAAGCATCA GTGACAACGC GCCGATCCCG GTGATGATGA CCAAGTCGGT GATCGACCGC
GGCATCGACA TGGCGCTGCC CGACGGCTTC GAGGCCGAGG GCGACGCCTC CTTCCTGTTG
TACTTCACCA AAGATCGCGA CGAGGGCCTG AAGGCCTTCA AGGAAAAGCG ATCGCCAGCG
TTCCGCGGAG AATGA
 
Protein sequence
MNYQDVILSR ESGWIEITIN RPDKLNSLRE QTAEEILAIL GEVEHDREVR AVILRGSDKA 
FCTGIDTSEF QIAENGYFDF YRFRKRNRKV NRLFREIGSF TKPLIAAIEG FALGGGLELA
LVGDIIVAGA NAKFGLPEIK LGMMPGGGGT QTLPRLIGKP LAKELMWTGR RITAAEAERY
RMVNHVTEAG HAIDKAREIA KSISDNAPIP VMMTKSVIDR GIDMALPDGF EAEGDASFLL
YFTKDRDEGL KAFKEKRSPA FRGE