Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0853 |
Symbol | |
ID | 3969811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 941217 |
End bp | 942677 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637923969 |
Product | aldehyde dehydrogenase |
Protein accession | YP_530742 |
Protein GI | 90422372 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.55655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCATGA CTGCTCTGCA TGCGGATAAT CTGATCGACG GCGCCTGGCA GCCGGCGCAA TCCGGCGCCA CGGCGCCGAG CCTTGATCCG TCGAGCGGCG GCACGATCGG TGGCTTCGCG GCTGGTGGCG CGGCGGATGC GCAGGCCGCG GTAGCGGCGG CGCGGCGCGC CTTCGAGCGG CCGGAGTGGT CGCAGAACCC GCGGGCGCGG CAGATGGTGA TGCTGCGCTG GGCCGACCGG ATGGAGGCGC AGGCCGATCA GCTCGCCCGG CTGCTGACAC TGGAGAACGG CAAGCCGCTG CCGCAGTCGC GCGGCGAAAT CGCCGGCAGC GTCTCGGAGA TCCGTTATTA CGCCGGGCTC ACGCGTTACA TCCCCGGCCA CGTGTTCGAG GTCGAGCCGG GCAGTTTCTC GACGTTGTTG AAAGAACCGG CCGGCGTCGC CGGACTGATC ATTCCGTGGA ACGCGCCGGC GGTGCTGCTG ATCCGCGCGC TGACGCCGGC GCTCGCCGCC GGCTGCACCG TGGTGATCAA GCCGGCGCCG CAGACCGCGC AGATCACCGC CGCGATCATC AAATGCCTGC ACGAGGTCGA CGGGCTGCCG CGCGGCGTGG TCAATCTGGT CAGCGAGCAG GGCCACCAAG TGGCCGAGCA TCTGGTGACC TCGAACGACG TCGACGTCAT CAGCTTCACC GGCTCCAACG CCACCGGCGC GCGGATCATG GCGGCGGCGG CGCCGACCAT GAAGAAACTG TCGCTCGAGC TCGGCGGCAA ATCCGCTTGC CTGGTGTTCG ACGACGCCGA TATCGCCGAC GTGGCTCCGA AGCTCGCCGC TGCCGCCACC ATCATCGCCG GCCAGCAATG CACCGCCGCG CGCCGCGTGC TGGTGCATGC CTCGCGCTAC GACGAGATGA AGGCGGCGCT GAAAGCCGCG CTGGCGAACA TCCGCATTGC GCCGGGCAGC GCGGCGGGCG CCGAGATGGG TCCGCTGATC GACGCAGCCT CGCTGGCCGC CGTGGCGAAG CGCGCCGACG AGGCGATGCA GGCCGCCGAC GAGGTGGTGC TGCGCGGCGG CAGGCCCGCC GGCGACCTCG CCAACGGTTA CTTCCTGTCG CCGACGCTCG TGGCGCATCG CGACACGTCG GCGTTCTTCG TCCAGGAAGA GATTTTTGGG CCGCTGGTGG TGCTCGAAAA ATTCGAGGAC GAGAAGGAGG CGGTGGCCCG CGCCAATCAC AGCGACTACG GGCTGTCCGC CAGCGTGTGG ACCCATGACG GCGCCCGCGC GATGCGGGTG GCGAGGGCGC TGCGCAACGG CACGGTGTGG ATCAACGACC ACAACAAGCT ATTCGCCGAA GCCGAGACCG GCGGTTATCG CCGCAGCGGG CTCGGCCGCC TGCACGGCTA TGACGCGCTG ATCGACTTCC TCGAGATCAA GCACGTCTAT CAGAGCTGCG GCGTAGTGTA G
|
Protein sequence | MGMTALHADN LIDGAWQPAQ SGATAPSLDP SSGGTIGGFA AGGAADAQAA VAAARRAFER PEWSQNPRAR QMVMLRWADR MEAQADQLAR LLTLENGKPL PQSRGEIAGS VSEIRYYAGL TRYIPGHVFE VEPGSFSTLL KEPAGVAGLI IPWNAPAVLL IRALTPALAA GCTVVIKPAP QTAQITAAII KCLHEVDGLP RGVVNLVSEQ GHQVAEHLVT SNDVDVISFT GSNATGARIM AAAAPTMKKL SLELGGKSAC LVFDDADIAD VAPKLAAAAT IIAGQQCTAA RRVLVHASRY DEMKAALKAA LANIRIAPGS AAGAEMGPLI DAASLAAVAK RADEAMQAAD EVVLRGGRPA GDLANGYFLS PTLVAHRDTS AFFVQEEIFG PLVVLEKFED EKEAVARANH SDYGLSASVW THDGARAMRV ARALRNGTVW INDHNKLFAE AETGGYRRSG LGRLHGYDAL IDFLEIKHVY QSCGVV
|
| |