Gene RPC_0853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0853 
Symbol 
ID3969811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp941217 
End bp942677 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content69% 
IMG OID637923969 
Productaldehyde dehydrogenase 
Protein accessionYP_530742 
Protein GI90422372 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.55655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATGA CTGCTCTGCA TGCGGATAAT CTGATCGACG GCGCCTGGCA GCCGGCGCAA 
TCCGGCGCCA CGGCGCCGAG CCTTGATCCG TCGAGCGGCG GCACGATCGG TGGCTTCGCG
GCTGGTGGCG CGGCGGATGC GCAGGCCGCG GTAGCGGCGG CGCGGCGCGC CTTCGAGCGG
CCGGAGTGGT CGCAGAACCC GCGGGCGCGG CAGATGGTGA TGCTGCGCTG GGCCGACCGG
ATGGAGGCGC AGGCCGATCA GCTCGCCCGG CTGCTGACAC TGGAGAACGG CAAGCCGCTG
CCGCAGTCGC GCGGCGAAAT CGCCGGCAGC GTCTCGGAGA TCCGTTATTA CGCCGGGCTC
ACGCGTTACA TCCCCGGCCA CGTGTTCGAG GTCGAGCCGG GCAGTTTCTC GACGTTGTTG
AAAGAACCGG CCGGCGTCGC CGGACTGATC ATTCCGTGGA ACGCGCCGGC GGTGCTGCTG
ATCCGCGCGC TGACGCCGGC GCTCGCCGCC GGCTGCACCG TGGTGATCAA GCCGGCGCCG
CAGACCGCGC AGATCACCGC CGCGATCATC AAATGCCTGC ACGAGGTCGA CGGGCTGCCG
CGCGGCGTGG TCAATCTGGT CAGCGAGCAG GGCCACCAAG TGGCCGAGCA TCTGGTGACC
TCGAACGACG TCGACGTCAT CAGCTTCACC GGCTCCAACG CCACCGGCGC GCGGATCATG
GCGGCGGCGG CGCCGACCAT GAAGAAACTG TCGCTCGAGC TCGGCGGCAA ATCCGCTTGC
CTGGTGTTCG ACGACGCCGA TATCGCCGAC GTGGCTCCGA AGCTCGCCGC TGCCGCCACC
ATCATCGCCG GCCAGCAATG CACCGCCGCG CGCCGCGTGC TGGTGCATGC CTCGCGCTAC
GACGAGATGA AGGCGGCGCT GAAAGCCGCG CTGGCGAACA TCCGCATTGC GCCGGGCAGC
GCGGCGGGCG CCGAGATGGG TCCGCTGATC GACGCAGCCT CGCTGGCCGC CGTGGCGAAG
CGCGCCGACG AGGCGATGCA GGCCGCCGAC GAGGTGGTGC TGCGCGGCGG CAGGCCCGCC
GGCGACCTCG CCAACGGTTA CTTCCTGTCG CCGACGCTCG TGGCGCATCG CGACACGTCG
GCGTTCTTCG TCCAGGAAGA GATTTTTGGG CCGCTGGTGG TGCTCGAAAA ATTCGAGGAC
GAGAAGGAGG CGGTGGCCCG CGCCAATCAC AGCGACTACG GGCTGTCCGC CAGCGTGTGG
ACCCATGACG GCGCCCGCGC GATGCGGGTG GCGAGGGCGC TGCGCAACGG CACGGTGTGG
ATCAACGACC ACAACAAGCT ATTCGCCGAA GCCGAGACCG GCGGTTATCG CCGCAGCGGG
CTCGGCCGCC TGCACGGCTA TGACGCGCTG ATCGACTTCC TCGAGATCAA GCACGTCTAT
CAGAGCTGCG GCGTAGTGTA G
 
Protein sequence
MGMTALHADN LIDGAWQPAQ SGATAPSLDP SSGGTIGGFA AGGAADAQAA VAAARRAFER 
PEWSQNPRAR QMVMLRWADR MEAQADQLAR LLTLENGKPL PQSRGEIAGS VSEIRYYAGL
TRYIPGHVFE VEPGSFSTLL KEPAGVAGLI IPWNAPAVLL IRALTPALAA GCTVVIKPAP
QTAQITAAII KCLHEVDGLP RGVVNLVSEQ GHQVAEHLVT SNDVDVISFT GSNATGARIM
AAAAPTMKKL SLELGGKSAC LVFDDADIAD VAPKLAAAAT IIAGQQCTAA RRVLVHASRY
DEMKAALKAA LANIRIAPGS AAGAEMGPLI DAASLAAVAK RADEAMQAAD EVVLRGGRPA
GDLANGYFLS PTLVAHRDTS AFFVQEEIFG PLVVLEKFED EKEAVARANH SDYGLSASVW
THDGARAMRV ARALRNGTVW INDHNKLFAE AETGGYRRSG LGRLHGYDAL IDFLEIKHVY
QSCGVV