Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0835 |
Symbol | |
ID | 3969832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 921328 |
End bp | 922422 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637923951 |
Product | LysR family transcriptional regulator |
Protein accession | YP_530724 |
Protein GI | 90422354 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.643048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.134814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTTC CTCCCAGCTT CCGGCAGGTT CGCGCCTTTC TGGCGCTCGC GCGACACCTG AAATTCACCA GTGCGGCCCA AGAACTGAAT GTCTCGCAGC CCACGCTGAC GGTGCAGATC AATCAGTTAG AGCAACAGCT CGGCATCCGG CTGTTCGATC GCGACAAACG CCGGGTCGAA CTGACGCCGG CCGGCCGCAA CATATTGCCG CTGATGGAAC GTCTGTCCTT GAACATGGAC GAGGTTCTGT TGGCCGCGTC GGATCTCACC TATGCCAAGC GCGGAATTAT CAGGGTGGCG GCGCTGCCCT CGGTGGCCGC CAGTTTTCTG CCGCGCGGGA TCAAGGACTT TCGCGAGCAA AATCCAGGCA TCATCATCGA CGTCTGGGAC GTGGTCGGCG AAGAGATCAT CAAGCTGGTG AAGGCCGAGG AAGTCGATTT TGGCATTGGC ACCCATTTCA GCGCCGACAA AAGCATCAAA GTGCAGGACT ATTTGTCCGA TAGTCTGTGC GCATTCTTCC CCGTCGAGCA TCCTTTGAAT ACAGCTGCAT CGGTCGTGTA CGTCAGAGAC GTCGCATCCT GTCCACTCGT TGTGACGCGG AAAAACAGTA GCGTCAGGGT GTTGTTCGAG CGCTCCATGG CGCGAGAAGG CTGCGAACTG AATATCGTCA TGGAGACCAA TTACATGTCG ACGGCGCTCA GCATGGCACG AGCCGGTGTC GGCGTCGCCA TTCTGCCGTC CACGGCCGTC GAAGCGGGGA ACATGGCCGG CCTCAGCTTC AAACCCATCG ATCCACCCCA TTTCAATCGC CGTGTCGGCA TCATCTGCAA GGCCGATCGC ACGCTGCAGC CTATTGCCAG TCACTTCGTC GAGGAATTGC TCAGGATGAC GCCGCTTCGT GCGGACAATG GCTTCAAGGA CCTCCGCCGG TTCGGCGCGT GGTCGGAACC ATGCGCATTC GACGAAAATG CTGACCTCGC AGCAACCTGG CAAGGGCAGC CGTGTTCGAT TACATCGCCC GCGTCCTCGG CGCCGTACGG CGCCATCGAA GATCATATGC CTCATCACTT GCGTTCGAGC GGAACGTCGG ACTAG
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Protein sequence | MTFPPSFRQV RAFLALARHL KFTSAAQELN VSQPTLTVQI NQLEQQLGIR LFDRDKRRVE LTPAGRNILP LMERLSLNMD EVLLAASDLT YAKRGIIRVA ALPSVAASFL PRGIKDFREQ NPGIIIDVWD VVGEEIIKLV KAEEVDFGIG THFSADKSIK VQDYLSDSLC AFFPVEHPLN TAASVVYVRD VASCPLVVTR KNSSVRVLFE RSMAREGCEL NIVMETNYMS TALSMARAGV GVAILPSTAV EAGNMAGLSF KPIDPPHFNR RVGIICKADR TLQPIASHFV EELLRMTPLR ADNGFKDLRR FGAWSEPCAF DENADLAATW QGQPCSITSP ASSAPYGAIE DHMPHHLRSS GTSD
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