| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0830 |
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| Symbol | |
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| ID | 3969865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 914095 |
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| End bp | 914751 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637923946 |
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| Product | 3-oxoacid CoA-transferase, subunit B |
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| Protein accession | YP_530719 |
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| Protein GI | 90422349 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.127359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGAAA AAACTCTGAT CGCCCGTCGC GTTGCACAGG AGATGAAGTC CGGCAACCTG
GTCAATCTCG GCATCGGCTT GCCGACGCTG GTCACGCGCT ATCTGCCGGC CGGCGTGAAC
GTGATGTTCC AATCCGAGAA CGGCATCATC GGCATGTCGA TGGGGCCTGA GCCGGGGTTG
GTACACGAAG ATCTCAGCGA CGCCGGCGGC AGTCCGATCG GCGCCGTTCC GGGAGCAGCT
GTGTTCGACA GCGCCACCTC GTTCGGACTG ATCCGCGGCG GCCATCTCGA CGTCACCGTG
CTCGGCGGCC TGCAGGTCGA TCAACGCGGG CAACTCGCCA ACTGGATGGT GCCCGGCAAG
ATGGTGCCCG GCATGGGCGG CGCGATGGAT CTGGTCTGCG GGGCGCGGCG CGTCATCGTC
GCGATGACCC ACACCGCCAA GGGCGTGGCG AAGATCATCG AGCGTTGCAC GCTGCCGCTG
ACCTCGGTGC GGCGCATCGA CCTCTTGGTC ACCGAACTCG CCGTCATCGT TCCCACCGCG
GAAGGGCTCG TTCTGCAGGA GACCGCCCCC GGTGTGAGCG TCGAACAGGT GCTGGCCGCC
ACCGGCTGCA AACTGATCGT GCCCTCCGAC GTCTTTGTCA TGCCGATTGC TGCGTAA
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| Protein sequence | MDEKTLIARR VAQEMKSGNL VNLGIGLPTL VTRYLPAGVN VMFQSENGII GMSMGPEPGL
VHEDLSDAGG SPIGAVPGAA VFDSATSFGL IRGGHLDVTV LGGLQVDQRG QLANWMVPGK
MVPGMGGAMD LVCGARRVIV AMTHTAKGVA KIIERCTLPL TSVRRIDLLV TELAVIVPTA
EGLVLQETAP GVSVEQVLAA TGCKLIVPSD VFVMPIAA
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