Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0793 |
Symbol | |
ID | 3969923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 878948 |
End bp | 879781 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637923909 |
Product | MltA-interacting MipA |
Protein accession | YP_530683 |
Protein GI | 90422313 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGCCT CACGTATGTT CTGGTCGGCC CTCGCTGCGC TGTCATTTCC GTCGGCGGCC ATCGCCGCCG ATCCCCTGGT GATGCTGCCG TCGGTGCCGT TCGTGCCCTC GGCCTCCGGC GGCTGGACGG TCACCCTGGG GCTCGGCGCA GCGATGAAAC CGTCTTATCC CGGTGCCGAC AGTTGGATGC TGAGCCCGAA ACCGATCATC TCGGTGCGCC GCGCCGGGTC GCCCGAGCGG TTCAAGAGCA TGCGCGACAA TCCGAGCTTC GCCCTGATCG ATTACGGCGG GTTTCGCGCC GGTCCGGTCG GCACCTACAA GAGCGCCCGC AAGGCCGGCG ATCACGACGA ACTGCGCGGG TTGAACGACG TCAAATTCAC CGTCGAAATC GGCGGCTTCG CCGAATATTA CGCGTTCGAC TGGTTGCGGG TGCGCTCCGA AGTGCGCCGC GGCTTCGGCG GTCATGAAGG CATCGTGGCG GATTTTTCCG CCGATGTGAT CGTGCCGCTG AACGAGCGCA TCTCGCTCTC GGCGGGCCCG CGCTACACGC TGACCGACGC GAAATACGCC AACACCTATT TCGGCATCAG CAATAGCGAG GCGCTGGCGT CGGGGCTGCC CGCTTATGAC GCGAAGGGCG GCTCCAACGC GGTCGGCGCC GGCGCGCAAG TGCGTTACAA GCTCAATGCG CAATGGGAGT TGCGGGGCTA TGTCGAATAC GACAAATTGC TGGGCAGCGT CGCCGATAGC CCGCTGGTGA CGTTCCGCGG CTCCACCGAC CAGATCACCT ATGGGCTCGG CGTGGCCTAT TCGTTCGACG TCGGTGTGCG CTAG
|
Protein sequence | MSASRMFWSA LAALSFPSAA IAADPLVMLP SVPFVPSASG GWTVTLGLGA AMKPSYPGAD SWMLSPKPII SVRRAGSPER FKSMRDNPSF ALIDYGGFRA GPVGTYKSAR KAGDHDELRG LNDVKFTVEI GGFAEYYAFD WLRVRSEVRR GFGGHEGIVA DFSADVIVPL NERISLSAGP RYTLTDAKYA NTYFGISNSE ALASGLPAYD AKGGSNAVGA GAQVRYKLNA QWELRGYVEY DKLLGSVADS PLVTFRGSTD QITYGLGVAY SFDVGVR
|
| |