Gene RPC_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0793 
Symbol 
ID3969923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp878948 
End bp879781 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content65% 
IMG OID637923909 
ProductMltA-interacting MipA 
Protein accessionYP_530683 
Protein GI90422313 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCT CACGTATGTT CTGGTCGGCC CTCGCTGCGC TGTCATTTCC GTCGGCGGCC 
ATCGCCGCCG ATCCCCTGGT GATGCTGCCG TCGGTGCCGT TCGTGCCCTC GGCCTCCGGC
GGCTGGACGG TCACCCTGGG GCTCGGCGCA GCGATGAAAC CGTCTTATCC CGGTGCCGAC
AGTTGGATGC TGAGCCCGAA ACCGATCATC TCGGTGCGCC GCGCCGGGTC GCCCGAGCGG
TTCAAGAGCA TGCGCGACAA TCCGAGCTTC GCCCTGATCG ATTACGGCGG GTTTCGCGCC
GGTCCGGTCG GCACCTACAA GAGCGCCCGC AAGGCCGGCG ATCACGACGA ACTGCGCGGG
TTGAACGACG TCAAATTCAC CGTCGAAATC GGCGGCTTCG CCGAATATTA CGCGTTCGAC
TGGTTGCGGG TGCGCTCCGA AGTGCGCCGC GGCTTCGGCG GTCATGAAGG CATCGTGGCG
GATTTTTCCG CCGATGTGAT CGTGCCGCTG AACGAGCGCA TCTCGCTCTC GGCGGGCCCG
CGCTACACGC TGACCGACGC GAAATACGCC AACACCTATT TCGGCATCAG CAATAGCGAG
GCGCTGGCGT CGGGGCTGCC CGCTTATGAC GCGAAGGGCG GCTCCAACGC GGTCGGCGCC
GGCGCGCAAG TGCGTTACAA GCTCAATGCG CAATGGGAGT TGCGGGGCTA TGTCGAATAC
GACAAATTGC TGGGCAGCGT CGCCGATAGC CCGCTGGTGA CGTTCCGCGG CTCCACCGAC
CAGATCACCT ATGGGCTCGG CGTGGCCTAT TCGTTCGACG TCGGTGTGCG CTAG
 
Protein sequence
MSASRMFWSA LAALSFPSAA IAADPLVMLP SVPFVPSASG GWTVTLGLGA AMKPSYPGAD 
SWMLSPKPII SVRRAGSPER FKSMRDNPSF ALIDYGGFRA GPVGTYKSAR KAGDHDELRG
LNDVKFTVEI GGFAEYYAFD WLRVRSEVRR GFGGHEGIVA DFSADVIVPL NERISLSAGP
RYTLTDAKYA NTYFGISNSE ALASGLPAYD AKGGSNAVGA GAQVRYKLNA QWELRGYVEY
DKLLGSVADS PLVTFRGSTD QITYGLGVAY SFDVGVR