| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0749 |
|---|
| Symbol | |
|---|
| ID | 3969974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 826038 |
|---|
| End bp | 826964 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637923864 |
|---|
| Product | tetratricopeptide TPR_2 |
|---|
| Protein accession | YP_530639 |
|---|
| Protein GI | 90422269 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4976] Predicted methyltransferase (contains TPR repeat) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.385476 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCAC GCCTGTTCAT GTCATCGGGC GATATGCTCG CCGATCGGCG GTTCGATTTC
GCGCGCGATC TGCAAGTCCA AGGCGATCTG GTGGCGGCCG AGGATCTATT GGTCCAGGTG
GCTAGCCTGG CGCCGGGTTT CGCCACCGCG TGGTTCGCGT TGGGCGAAGT CCGCGAACAA
CTCGGCGACC GCGACGGCGC GGTGATCGCG TTCCGCAATG CGCAGATGAC CGATCCCGAC
GACCGCAACG GCGCGGCGCT GCGGCTGATG CGGCTGGATG CCGCCGACCT CGCGGCGATG
CCGCCGGGCT ATGTCCGCGC GCTGTTCGAT CAATACGCCC CGAACTTCGA GGCCGCGGTG
CTGGACGATC TCGGCTATCG CGGACCGGCG CTGCTGCGCC AGGCGATCCT TGCGGTGCGC
GCCGCGGCGG ATCGACCGGC GTGGTTCGAT CACGGCCTCG ACCTCGGCTG CGGCACCGGG
CTCGCTGCCT TGGCTTTGGC GCCTTATGTC GGCGAGATGA TCGGTTTCGA CCTATCGCCG
CGCATGGTGG AGCGCGCCCG CGCCACCAAG CGCTACGCCC AGGTGGAGGA AGCGGAGGTG
GTCGATGCGC TGCGCGACCG GCCGACCGCC AGCGCCGATT TGATCCTTGC CGCCGATGTC
GTCGGCTATC TTTGCGACGT CAACCCGCTG CTGATCGAAG CCGCGCGGGT GCTGGCGCCG
GATGGATTGC TGGCGCTGAC GGCGGAAACC CATGACAGCG ACGGCGTCGT GCTCGGCGCC
GGGCTGCGCT ACGCCCATGG CGCGCGCTAT CTGCAGAGCG CCATGGCGGC CGCGGGCCTG
GTCGTAAAGC ACCTGGAGCA GGCGTCGGCG CGCAGCGAAG CCGGCGTGCC GGTGCCGGGG
CTGGTGATCG TCGCGGCGCA GCCATAG
|
|---|
| Protein sequence | MPARLFMSSG DMLADRRFDF ARDLQVQGDL VAAEDLLVQV ASLAPGFATA WFALGEVREQ
LGDRDGAVIA FRNAQMTDPD DRNGAALRLM RLDAADLAAM PPGYVRALFD QYAPNFEAAV
LDDLGYRGPA LLRQAILAVR AAADRPAWFD HGLDLGCGTG LAALALAPYV GEMIGFDLSP
RMVERARATK RYAQVEEAEV VDALRDRPTA SADLILAADV VGYLCDVNPL LIEAARVLAP
DGLLALTAET HDSDGVVLGA GLRYAHGARY LQSAMAAAGL VVKHLEQASA RSEAGVPVPG
LVIVAAQP
|
|---|
| |