Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0595 |
Symbol | |
ID | 3970722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 646545 |
End bp | 647087 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637923712 |
Product | HPr kinase |
Protein accession | YP_530489 |
Protein GI | 90422119 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0343578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC CCGCTGCGTC CAGTTCTGGT TCAGGCACCG TTCATGCCTC GGCGGTGAAA GTCGGCGACC GCGCGGTGCT GATCCGCGGC CCCTCCGGCG CCGGTAAGTC GCGGCTCGCC TTCGACCTGA TGCTGGCCGG ACGGGCCGGG ATGATCCCGG CCGCGATGTT GATCGGCGAC GACCGGGTGC ATCTCGAACG CCGTGCCGAC GGTCTGGTGG TGCGGGCCGC GGCGGCGATC GCCGGGCTGA TCGAGATCCG CGGCCTCGGT CTGCGGCGCT GCGACTTTGT CGCCGAAGCC GTGGTCGGCC TGGTGGTCGA TCTGGCCGCA GGCGACGCCG AACGGCTGCC GCAGCCCGCG GCGTTGCGGA CAACCATCAA CGGCGTCGAA TTGCCGCGCA TCCCGGTTGG TGAAAGTTAC GAACCGCTAC CTCTGGTAGT GGCCGCATTC ACCACATTGG AAGGTTCAGG GCTTACAACG GATGAGGGAG ATTGTTCGAA GCGATTTGAT AACCATATAA TCCCCACTAT CGTCACCAAA TGA
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Protein sequence | MTEPAASSSG SGTVHASAVK VGDRAVLIRG PSGAGKSRLA FDLMLAGRAG MIPAAMLIGD DRVHLERRAD GLVVRAAAAI AGLIEIRGLG LRRCDFVAEA VVGLVVDLAA GDAERLPQPA ALRTTINGVE LPRIPVGESY EPLPLVVAAF TTLEGSGLTT DEGDCSKRFD NHIIPTIVTK
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