| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0560 |
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| Symbol | |
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| ID | 3970764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 609260 |
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| End bp | 611725 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637923677 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_530454 |
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| Protein GI | 90422084 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0784] FOG: CheY-like receiver
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCAGCC ACCGCGGGCC GCGGACGCCC GGCAGGGACG CGTTGGAGCT GTCCGGCCTG
ATCGCCCGCA CCGTCGGCCT GATCATCGAG CGGCACCATG CGACCAGTGC GTTGCGCGAG
CGCGAACACG AACTGACGCG GGTCCAGGCC ATCGCCAAGA TCGGCGGCGT GGTGGTCGAT
CTGCGCTACG GCCTCCACAA CGAACGCCGC TCGCCGGAAT ACAGCACGAT CCACGGGCTG
CCCCCCGATG CACCGGACGG CCACGAGGAT TGGGTGCGCA GGCTGCATCC GGACGACCGC
GACCGCGCGC TGCGGACCCT GCTCGATGCG ATCGCGGGCA CGGCCGATCA CTACTCAAGC
GAATATCGCA TCATCCGGCC GAACGACGGC CAGATCCGCT GGATCGCCGC CGAAGCGCAG
ATCGAGCGCA GTCCGGACGG CCGCGCCGAG CGGCTGGTCG GCGCCCACAT CGACATTACC
GATCGCACGC TGGCCAAGGA AACCCTGCGC GAAAGCGAAC AGCGCTTCCG GCTGATCGCC
AACAGCGCGC CGGTGCCGAT GTGGGTCAGC CGGCTGGACG GCAAGCGCGC CTTCGCCAAC
CAGGCCTATC TGGACTTTCT CGGGCTGGAC TACGACGCCG CGCTGGCGTT CGACTGGCGC
ACCGTGCTGC ATCCGGACGA TCTGCCGCGA ATCCTGCAGG AGCAGATCGC CGGCGAAACC
TCGCTGCAGC CGTTCGTGCT GGAGGCCCGC TATCGCCGCG CCGACGGGCC GTGGCGCTGG
ATGCGCTCGG AATCGCAGCC GCGCTGGGAC GCCGCCGGCA AGCACATCGG CTTCATCGGC
GTCGCCCACG ACATCACCGC CTCGAAGGAG GCCGAAACCG AGTTGCGGCG GCTCAACGAG
ACGCTTGAGC AGCGCATCAA GCAGCGCACC GCGCAATTGC AGGCCAACGA AGCGCAGATG
CGGGCGATGT TCGAGACCAC CAACCAATAT CAGGGCCTGC TCGATCTGAA GGGCAACATC
GTCTACATCA ACGCCACCGC ATTGGCCGGC ATCCGTAGCA CGGTCGACGC CGTGCTCGGC
ATTCGGTTCT GGGATTCGCC GTGGTTCACC GGCACCGAGG GGATGCGCGA CTGCGTGCGT
GGCGCCTTCG CGGCCGCGAA GAAGGGCGAA ACCGTGCGGA CCGAGATGCT GCTGCATCTG
CCGATCGGCG ACCGCTTCTT CGATTTCGCG ATGCGGCCGA TTTTCGACGA GCACGGCCGG
GTCTCCGCGG TGTTGCCGGA GGCCGTCGAC ATCACCGAGC GGCGCCATAG CGAGGAAGCG
TTGCGGCAGT CGCAGAAGAT GGAGGCGGTC GGTCAGCTGA CCGGCGGCGT GGCGCACGAC
TTCAACAACC TGCTGACCAT CATCCGTTCG GCCACTGATT TCCTGCGCCG CCGCGATCTG
CCGGAGGAGC GACGGCGGCG CTATATCGAC GCGATCTCCG AGACGGTCGA CCGTGCCTCG
ACGCTCACCG GGCAGCTGTT GGCGTTCGCG CGGCGGCAGC CGTTGACGCC GCAGGTGTTC
AACATCGGCT CGCAGGTCGA GAGCATCGCG CAATTGATCC GCCCCTTGGT CGGCAGCCGC
ATCCAGATCG CGGTCCATCT CGGCTGTCCG GACTGCTTTG CGATGGCCGA CGTGGCGCAG
TTCGAAACCG CATTGGTCAA TCTCGCGGTC AACGGCCGCG ATGCCATGAA CGGCGAAGGC
TGCCTGACCT TCGACGTCGT CAAGGTCGAG GCGCTTCCGC CGCTGCGCAG CCATCCCGGC
CGCCGCGGCA GCTTCATAGC AGTGGCGGTG ACCGATACCG GATCGGGTAT TGCTCCCGAA
CGGCTCGAAG CCATCTTCGA GCCGTTCTAC ACCACCAAAG AGGTCGGCAA GGGCACCGGG
CTCGGGCTCA GCCAAGCGTT CGGCTTTGCC AAGCAGTCCG GCGGCGAAAT CGAAGTGACC
AGTACGCTCG GCCACGGATC GACCTTCACC ATCTACCTGC CGCAAGCCGA GAGTCCCGCC
GAACTCGCCG ATGTCGTCGC GGTGGGCGCC GAGGTGACGG CGAGCGGCCG CGGCCATCGC
GTGCTGGTGG TGGAAGACAA CGAAGACGTC GGCCGGTTTT CCACCGAGCT GTTACGGGAC
CTCGGTTACG ACATTCGCTG GGTCGGCAAT GCCAACGAGG CGCTCGCGGC CATTTCGGAG
GACGAGTTCG CCTTCGATCT GGTGTTCTCC GACGTGATCA TGCCGGGGAT GAACGGCGTC
GAACTGGCGA CGCTGATCCG TGAGCGTTAT CCGGGTTTGC CGGTGGTGCT GACCAGCGGC
TACAGCACGG TGCTGGCGGA AAACGCCCAC CACGGTTTCG AACTGATTCA AAAGCCGTAT
TCGGTCGAAC TGCTGTCGCG CACCTTGCGC CGCGCCATCG CCGACCGGCG CACCGCGCTG
GCGTGA
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| Protein sequence | MVSHRGPRTP GRDALELSGL IARTVGLIIE RHHATSALRE REHELTRVQA IAKIGGVVVD
LRYGLHNERR SPEYSTIHGL PPDAPDGHED WVRRLHPDDR DRALRTLLDA IAGTADHYSS
EYRIIRPNDG QIRWIAAEAQ IERSPDGRAE RLVGAHIDIT DRTLAKETLR ESEQRFRLIA
NSAPVPMWVS RLDGKRAFAN QAYLDFLGLD YDAALAFDWR TVLHPDDLPR ILQEQIAGET
SLQPFVLEAR YRRADGPWRW MRSESQPRWD AAGKHIGFIG VAHDITASKE AETELRRLNE
TLEQRIKQRT AQLQANEAQM RAMFETTNQY QGLLDLKGNI VYINATALAG IRSTVDAVLG
IRFWDSPWFT GTEGMRDCVR GAFAAAKKGE TVRTEMLLHL PIGDRFFDFA MRPIFDEHGR
VSAVLPEAVD ITERRHSEEA LRQSQKMEAV GQLTGGVAHD FNNLLTIIRS ATDFLRRRDL
PEERRRRYID AISETVDRAS TLTGQLLAFA RRQPLTPQVF NIGSQVESIA QLIRPLVGSR
IQIAVHLGCP DCFAMADVAQ FETALVNLAV NGRDAMNGEG CLTFDVVKVE ALPPLRSHPG
RRGSFIAVAV TDTGSGIAPE RLEAIFEPFY TTKEVGKGTG LGLSQAFGFA KQSGGEIEVT
STLGHGSTFT IYLPQAESPA ELADVVAVGA EVTASGRGHR VLVVEDNEDV GRFSTELLRD
LGYDIRWVGN ANEALAAISE DEFAFDLVFS DVIMPGMNGV ELATLIRERY PGLPVVLTSG
YSTVLAENAH HGFELIQKPY SVELLSRTLR RAIADRRTAL A
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