Gene RPC_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0549 
Symbol 
ID3970790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp596420 
End bp597034 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content66% 
IMG OID637923665 
ProductNIPSNAP 
Protein accessionYP_530443 
Protein GI90422073 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.759836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.865249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTACG AACTGACCAC GCTGTCCGGG CCGCTGTTGC AACTCGCGTC GCTCTCGCAA 
GGCGCCCGCG CTTGGATCGC CGATCCCGCC GCACGGGGCG AGGTATTCGG CATCTGGCGC
AGCGACATCG GCACGCTCGG GCAATTGCTG GTCCTGCGCG GCTTTGCGGC CGAGGCCGAG
CTTCGCAAGG AGCGCGACCG TGCCCTGTTC AACACCAACC CGTTCAATTG CGTCGGCACC
GCGAGCGCGC TGAGCATGGA TAGCTATGCC GGATTTGCGT TTCTGCCGCC GGTTCGGCCG
CAGCACTACG GCGGGGTCTT CGAATTCAGA ACCTATCACC TGAAACCCGG TGGGCTGCCG
GCGACGCTTG CAGGGTGGGA GGCGGCGATC GCTCCGGCGC ACGACTACAC CGCCCACCTC
GTCATCAACA TGTATGCGCT CGATGGTCCG CCGCGCATCA CGCATATCTG GGGTTTCTCG
GGCGTGGACG AGCGGATGAA ACTTCGTGCC GATCACTACG CCGCCAAGCT GTGGCCGCCG
AAGGGCGGGC CCGAGCAGAT CGCGCAGGCC TCATCGACCA TCGCCATCGC CGAACCGGGC
TTGCCGCTCG GCTGA
 
Protein sequence
MIYELTTLSG PLLQLASLSQ GARAWIADPA ARGEVFGIWR SDIGTLGQLL VLRGFAAEAE 
LRKERDRALF NTNPFNCVGT ASALSMDSYA GFAFLPPVRP QHYGGVFEFR TYHLKPGGLP
ATLAGWEAAI APAHDYTAHL VINMYALDGP PRITHIWGFS GVDERMKLRA DHYAAKLWPP
KGGPEQIAQA SSTIAIAEPG LPLG