Gene RPC_0431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0431 
Symbol 
ID3970826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp465739 
End bp466566 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content66% 
IMG OID637923546 
Productnitrous oxide metabolic protein 
Protein accessionYP_530325 
Protein GI90421955 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.856673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCA TCGCCATCAT CGCCGCCAAG GAAATCCAGG AAGGCTTGCG CAACCGCTGG 
GTGCTGGCGA CCACGCTGTT GCTCGCAGCC CTGGCGCTGT CGCTGAGCTT CCTCGGCAGC
GCGCCGACCG GCAATGTCGG CGCCGGCGCG CTCGACGTCG TCGTGGTCTC GCTCTCCAGC
CTGACCATCT TCCTGTTGCC GCTGATTGCC CTCTTGATCT CGCACGACGC CGTGGTCGGC
GAGATGGAGC GCGGCACGAT GATTCTGCTG CTCAGCTATC CGGTCGGCCG CGGCCAGGTG
ATTTTGGGCA AATTCGCAGG CCACGTGCTG ATCCTCGGCT TCGCCACCGT GATCGGCTAC
GGCGCCGCCG GCCTCGCGCT GATGCTGACT GGCGCCTCGG CGCTGGCGGC GAGCTGGTAC
GCGTTCGGCG CCATGCTCGG CAGTTCGGTG ATGCTCGGCG CGGTGTTCGT GGCGATCGGC
TACCTGATCT CGAGTCTCGT GCGCGACCGC GGCACCGCGG CGGGCCTCTC GATCGGGGTC
TGGCTGTTGA TGGTGCTGGT GTTCGACATG GCGCTGTTGG GCATCCTGGT GGTCGACCAA
GGACGCATCA TTTCCGGGCC GATCCTGAAC GCGCTGCTGT TTCTCAACCC GACCGATCTG
TACCGGCTGA CCAATCTGAC CGGCTTCAAC GTCAGCCAGT TTTCCGGGAT GGCCGGGCTC
GCCGGCAGCA CCAATCCCGG ACTGTGGCCC TTGCTACTCG GGCTGTCGGT GTGGATCGCG
GTGCCGCTGG GGCTGTCGAT GCTGTCGTTT GCGCGGAGGG AATTATGA
 
Protein sequence
MRTIAIIAAK EIQEGLRNRW VLATTLLLAA LALSLSFLGS APTGNVGAGA LDVVVVSLSS 
LTIFLLPLIA LLISHDAVVG EMERGTMILL LSYPVGRGQV ILGKFAGHVL ILGFATVIGY
GAAGLALMLT GASALAASWY AFGAMLGSSV MLGAVFVAIG YLISSLVRDR GTAAGLSIGV
WLLMVLVFDM ALLGILVVDQ GRIISGPILN ALLFLNPTDL YRLTNLTGFN VSQFSGMAGL
AGSTNPGLWP LLLGLSVWIA VPLGLSMLSF ARREL