Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0399 |
Symbol | |
ID | 3970850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 432811 |
End bp | 433482 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637923513 |
Product | hypothetical protein |
Protein accession | YP_530293 |
Protein GI | 90421923 |
COG category | [S] Function unknown |
COG ID | [COG2121] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACGC CCGCTTTCAT CAAACGCATC CTGCGCTCGG ATGCGTTCCA GACCTCCATC AGCTATCCGC TGGCGGCGTA TTTTCAGATC GTGACCTGGA CGGCCAAATT CGACCGGCCG CGGCCGCCGG TTCCGGGGCC CTACATCATG GCGATGTGGC ACGGCCGGCT GATCATGCTG CCGATGCTGT GCATGGAAGA CAAGGCGCTG AAGGCGCTGA TCAGCGGCCA CCGCGACGGC CGCATCATCT CGAAGATCGG CGCGATCTTC GGAATCCAGA CCGTCACCGG ATCGAGCTCC AAGGGCGGCA TGCGCGCGGT GCGCGAATTG ATGCGGTTCG GCCGCGACGG CCATTGCCTG TTCGTCACCC CGGACGGGCC GCGCGGACCG CGGATGCACG TCAACGAGGG CGTTCTCGAT CTCGCCCGGC TGACCGGGCT GCCGATCCTG CCGGTGTCGA TCAGCCCGCA GCGCGCGGTG GTGTTCAAGA GCTGGGACCG GCTATTCCTG CCGAAGCCGT TCTCGAAGAT CGTGGTGCGC TGGGGCGCGC CGATCACGGT GGACGCCGAC GCCGATCGCG CCGTGATCAG CCAGCAGCTC GAAGCGGCGC TGACCGCGGT GCAACGCGAC GCCGACACGC TCGCCGGCCG GGCGCCGATC GAGGCGGCGT GA
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Protein sequence | MATPAFIKRI LRSDAFQTSI SYPLAAYFQI VTWTAKFDRP RPPVPGPYIM AMWHGRLIML PMLCMEDKAL KALISGHRDG RIISKIGAIF GIQTVTGSSS KGGMRAVREL MRFGRDGHCL FVTPDGPRGP RMHVNEGVLD LARLTGLPIL PVSISPQRAV VFKSWDRLFL PKPFSKIVVR WGAPITVDAD ADRAVISQQL EAALTAVQRD ADTLAGRAPI EAA
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