Gene RPC_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0399 
Symbol 
ID3970850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp432811 
End bp433482 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID637923513 
Producthypothetical protein 
Protein accessionYP_530293 
Protein GI90421923 
COG category[S] Function unknown 
COG ID[COG2121] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGC CCGCTTTCAT CAAACGCATC CTGCGCTCGG ATGCGTTCCA GACCTCCATC 
AGCTATCCGC TGGCGGCGTA TTTTCAGATC GTGACCTGGA CGGCCAAATT CGACCGGCCG
CGGCCGCCGG TTCCGGGGCC CTACATCATG GCGATGTGGC ACGGCCGGCT GATCATGCTG
CCGATGCTGT GCATGGAAGA CAAGGCGCTG AAGGCGCTGA TCAGCGGCCA CCGCGACGGC
CGCATCATCT CGAAGATCGG CGCGATCTTC GGAATCCAGA CCGTCACCGG ATCGAGCTCC
AAGGGCGGCA TGCGCGCGGT GCGCGAATTG ATGCGGTTCG GCCGCGACGG CCATTGCCTG
TTCGTCACCC CGGACGGGCC GCGCGGACCG CGGATGCACG TCAACGAGGG CGTTCTCGAT
CTCGCCCGGC TGACCGGGCT GCCGATCCTG CCGGTGTCGA TCAGCCCGCA GCGCGCGGTG
GTGTTCAAGA GCTGGGACCG GCTATTCCTG CCGAAGCCGT TCTCGAAGAT CGTGGTGCGC
TGGGGCGCGC CGATCACGGT GGACGCCGAC GCCGATCGCG CCGTGATCAG CCAGCAGCTC
GAAGCGGCGC TGACCGCGGT GCAACGCGAC GCCGACACGC TCGCCGGCCG GGCGCCGATC
GAGGCGGCGT GA
 
Protein sequence
MATPAFIKRI LRSDAFQTSI SYPLAAYFQI VTWTAKFDRP RPPVPGPYIM AMWHGRLIML 
PMLCMEDKAL KALISGHRDG RIISKIGAIF GIQTVTGSSS KGGMRAVREL MRFGRDGHCL
FVTPDGPRGP RMHVNEGVLD LARLTGLPIL PVSISPQRAV VFKSWDRLFL PKPFSKIVVR
WGAPITVDAD ADRAVISQQL EAALTAVQRD ADTLAGRAPI EAA