Gene RPC_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0229 
Symbol 
ID3971139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp245733 
End bp246134 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content62% 
IMG OID637923342 
Producthypothetical protein 
Protein accessionYP_530123 
Protein GI90421753 
COG category[S] Function unknown 
COG ID[COG3824] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00794732 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGTCGT CCGCAAAATC GCCGTCGCTC GCCGAAATGG AAGTCATGGC GCACGACATG 
TTCAGCCAGC TGCCGAAGGG GTTTCGCGAC CTCTGCGCCG GCGTGATCAT CCGCGTCGAG
GATTTTCCCA CCGACGAGGT GCTGGAGGAG ATGCAGGCCG AAAGCGAATT CGACCTGCTC
GGCCTGTTCC AAGGCGTCGG GCTGCCGCAT CAAAGCCATG ACGACATCGC CCCGCTGCCC
AATATGATCT GGCTGTACCG ACGCCCGATC CTGGATTACT GGGCCGAACA CGACGAAAGC
CTCGGCCATG TCGTCCGCCA CGTGCTGGTG CACGAGATCG GCCACCATTT CGGGCTGTCG
GACGACGACA TGGAAGCCAT CGAGGCCGAG GTGGCCGACT AG
 
Protein sequence
MWSSAKSPSL AEMEVMAHDM FSQLPKGFRD LCAGVIIRVE DFPTDEVLEE MQAESEFDLL 
GLFQGVGLPH QSHDDIAPLP NMIWLYRRPI LDYWAEHDES LGHVVRHVLV HEIGHHFGLS
DDDMEAIEAE VAD